A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3678384



Internal ID19396392
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:130001703..130001792hg38UCSC Ensembl
chr8:131013949..131014038hg19UCSC Ensembl
Cytoband8q24.21
Allele length
AssemblyAllele length
hg3890
hg1990
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16499750
Samples
Known GenesFAM49B
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3678384
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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