A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3678290



Internal ID19396298
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:98893421..98893488hg38UCSC Ensembl
chr8:99905649..99905716hg19UCSC Ensembl
Cytoband8q22.2
Allele length
AssemblyAllele length
hg3868
hg1968
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16499665
Samples
Known GenesSTK3
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3678290
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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