A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3678213



Internal ID19396221
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:72211598..72211686hg38UCSC Ensembl
chr8:73123833..73123921hg19UCSC Ensembl
Cytoband8q13.3
Allele length
AssemblyAllele length
hg3889
hg1989
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16499596
Samples
Known GenesLOC392232
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3678213
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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