A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3677613



Internal ID19395621
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:116606553..116606871hg38UCSC Ensembl
chr1:117149175..117149493hg19UCSC Ensembl
Cytoband1p13.1
Allele length
AssemblyAllele length
hg38319
hg19319
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16499056
Samples
Known GenesIGSF3
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3677613
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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