A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3677103



Internal ID19395111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:39833453..39833521hg38UCSC Ensembl
chr7:39873052..39873120hg19UCSC Ensembl
Cytoband7p14.1
Allele length
AssemblyAllele length
hg3869
hg1969
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16498597
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3677103
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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