A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3676405



Internal ID19047727
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:100509819..100509903hg38UCSC Ensembl
chr6:100957695..100957779hg19UCSC Ensembl
Cytoband6q16.3
Allele length
AssemblyAllele length
hg3885
hg1985
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16497969
Samples
Known GenesASCC3
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3676405
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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