A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3674422



Internal ID19392430
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:7699692..7699771hg38UCSC Ensembl
chrY:7567733..7567812hg19UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg3880
hg1980
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16496184
Samples
Known GenesTTTY16
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3674422
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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