A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3674417



Internal ID19392425
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:6358034..6359239hg38UCSC Ensembl
chrY:6226075..6227280hg19UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg381206
hg191206
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16496180
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3674417
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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