A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3673125



Internal ID19391133
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:49731303..49731390hg38UCSC Ensembl
chr13:50305439..50305526hg19UCSC Ensembl
Cytoband13q14.2
Allele length
AssemblyAllele length
hg3888
hg1988
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16495016
Samples
Known GenesKPNA3
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3673125
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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