A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3672795



Internal ID19390803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:18523107..18523108hg38UCSC Ensembl
chr11:18544654..18544655hg19UCSC Ensembl
Cytoband11p15.1
Allele length
AssemblyAllele length
hg382
hg192
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16494719
Samples
Known GenesTSG101
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3672795
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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