A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3671407



Internal ID19389415
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:102963532..102963532hg38UCSC Ensembl
chr4:103884689..103884689hg19UCSC Ensembl
Cytoband4q24
Allele length
AssemblyAllele length
hg3867
hg1967
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16493470
Samples
Known GenesSLC9B1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3671407
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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