A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3671224



Internal ID19389232
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:92314699..92314786hg38UCSC Ensembl
chr1:92780256..92780343hg19UCSC Ensembl
Cytoband1p22.1
Allele length
AssemblyAllele length
hg3888
hg1988
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16493304
Samples
Known GenesRPAP2
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3671224
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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