A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3670723



Internal ID19388731
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:4880563..4880563hg38UCSC Ensembl
chrY:4748604..4748604hg19UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg3871
hg1971
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16492855
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3670723
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer