A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3670133



Internal ID19041455
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:11098987..11098987hg38UCSC Ensembl
chr19:11209663..11209663hg19UCSC Ensembl
Cytoband19p13.2
Allele length
AssemblyAllele length
hg38120
hg19120
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16492323
Samples
Known GenesLDLR
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3670133
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer