A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3669284



Internal ID19387292
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:136030718..136030783hg38UCSC Ensembl
chr3:135749560..135749625hg19UCSC Ensembl
Cytoband3q22.3
Allele length
AssemblyAllele length
hg3866
hg1966
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16491560
Samples
Known GenesPPP2R3A
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3669284
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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