A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3668229



Internal ID19386237
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:37935997..37935997hg38UCSC Ensembl
chr9:37935994..37935994hg19UCSC Ensembl
Cytoband9p13.2
Allele length
AssemblyAllele length
hg3877
hg1977
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16490610
Samples
Known GenesSHB
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3668229
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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