A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3667372



Internal ID19385380
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:40079153..40079153hg38UCSC Ensembl
chr6:40046892..40046892hg19UCSC Ensembl
Cytoband6p21.2
Allele length
AssemblyAllele length
hg38318
hg19318
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16489839
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3667372
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer