A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3667134



Internal ID19385142
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:68092141..68092141hg38UCSC Ensembl
chr1:68557824..68557824hg19UCSC Ensembl
Cytoband1p31.3
Allele length
AssemblyAllele length
hg38146
hg19146
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16489624
Samples
Known GenesGNG12-AS1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3667134
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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