A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3667069



Internal ID19385077
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:24574743..24574743hg38UCSC Ensembl
chr5:24574852..24574852hg19UCSC Ensembl
Cytoband5p14.2
Allele length
AssemblyAllele length
hg38985
hg19985
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16489566
Samples
Known GenesCDH10
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3667069
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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