A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3664534



Internal ID19382542
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:48315720..48315720hg38UCSC Ensembl
chr3:48357210..48357210hg19UCSC Ensembl
Cytoband3p21.31
Allele length
AssemblyAllele length
hg3862
hg1962
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16487285
Samples
Known GenesSPINK8
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3664534
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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