A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3663454



Internal ID19034776
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:144394989..144394989hg38UCSC Ensembl
chr2:145152556..145152556hg19UCSC Ensembl
Cytoband2q22.3
Allele length
AssemblyAllele length
hg3853
hg1953
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16486311
Samples
Known GenesZEB2
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3663454
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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