A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3659385



Internal ID19030707
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:35562917..35563051hg38UCSC Ensembl
chr19:36053819..36053953hg19UCSC Ensembl
Cytoband19q13.12
Allele length
AssemblyAllele length
hg38135
hg19135
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16465236
Samples
Known GenesATP4A
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3659385
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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