A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3658400



Internal ID19376408
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:62605074..62605074hg38UCSC Ensembl
chr17:60682435..60682435hg19UCSC Ensembl
Cytoband17q23.2
Allele length
AssemblyAllele length
hg3868
hg1968
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16481764
Samples
Known GenesTLK2
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3658400
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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