A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3656328



Internal ID19374336
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:42203431..42203431hg38UCSC Ensembl
chr15:42495629..42495629hg19UCSC Ensembl
Cytoband15q15.1
Allele length
AssemblyAllele length
hg3868
hg1968
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16479900
Samples
Known GenesVPS39
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3656328
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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