A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3654619



Internal ID19372627
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:75032841..75033041hg38UCSC Ensembl
chr18:72744797..72744997hg19UCSC Ensembl
Cytoband18q22.3
Allele length
AssemblyAllele length
hg38201
hg19201
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16464807
Samples
Known GenesZNF407
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3654619
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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