A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3650884



Internal ID19368892
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:125265635..125265635hg38UCSC Ensembl
chr9:128027914..128027914hg19UCSC Ensembl
Cytoband9q33.3
Allele length
AssemblyAllele length
hg38840
hg19840
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16475000
Samples
Known GenesGAPVD1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3650884
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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