A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3647750



Internal ID7034490
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr22:38978018..38979674hg38UCSC Ensembl
Innerchr22:38978046..38979646hg38UCSC Ensembl
Outerchr22:38977990..38979702hg38UCSC Ensembl
chr22:39374023..39375679hg19UCSC Ensembl
Innerchr22:39374051..39375651hg19UCSC Ensembl
Outerchr22:39373995..39375707hg19UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg381657
hg191657
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16427404, essv16427538, essv16427613, essv16427296, essv16427636, essv16427452, essv16427291, essv16427551, essv16427212, essv16427219, essv16427349, essv16427624, essv16427377, essv16427182, essv16427152, essv16427554, essv16427583, essv16427620, essv16427518, essv16427572, essv16427459, essv16427122, essv16427292, essv16427166, essv16427461, essv16427458, essv16427300, essv16427317, essv16427450, essv16427488, essv16427217, essv16427269, essv16427183, essv16427407, essv16427608, essv16427618, essv16427475, essv16427326, essv16427514, essv16427612, essv16427325, essv16427424, essv16427615, essv16427286, essv16427141, essv16427256, essv16427226, essv16427545, essv16427327, essv16427532, essv16427339, essv16427304, essv16427199, essv16427426, essv16427625, essv16427359, essv16427262, essv16427485, essv16427280, essv16427148, essv16427178, essv16427527, essv16427143, essv16427233, essv16427274, essv16427544, essv16427192, essv16427418, essv16427537, essv16427621, essv16427626, essv16427198, essv16427160, essv16427298, essv16427341, essv16427522, essv16427492, essv16427420, essv16427385, essv16427497, essv16427124, essv16427499, essv16427466, essv16427354, essv16427478, essv16427181, essv16427290, essv16427411, essv16427234, essv16427507, essv16427307, essv16427208, essv16427323, essv16427279, essv16427484, essv16427597, essv16427640, essv16427167, essv16427594, essv16427172, essv16427665, essv16427231, essv16427266, essv16427546, essv16427414, essv16427489, essv16427416, essv16427205, essv16427406, essv16427654, essv16427196, essv16427399, essv16427476, essv16427437, essv16427239, essv16427403, essv16427439, essv16427381, essv16427257, essv16427328, essv16427282, essv16427315, essv16427372, essv16427519, essv16427289, essv16427187, essv16427643, essv16427463, essv16427556, essv16427185, essv16427481, essv16427389, essv16427614, essv16427642, essv16427574, essv16427227, essv16427660, essv16427579, essv16427237, essv16427585, essv16427374, essv16427628, essv16427664, essv16427144, essv16427398, essv16427367, essv16427480, essv16427441, essv16427254, essv16427347, essv16427320, essv16427255, essv16427293, essv16427332, essv16427606, essv16427587, essv16427197, essv16427456, essv16427340, essv16427455, essv16427468, essv16427329, essv16427370, essv16427314, essv16427321, essv16427550, essv16427246, essv16427393, essv16427373, essv16427194, essv16427578, essv16427569, essv16427220, essv16427179, essv16427378, essv16427206, essv16427592, essv16427250, essv16427659, essv16427617, essv16427529, essv16427309, essv16427154, essv16427495, essv16427238, essv16427362, essv16427454, essv16427130, essv16427559, essv16427371, essv16427591, essv16427386, essv16427156, essv16427306, essv16427137, essv16427364, essv16427153, essv16427627, essv16427127, essv16427242, essv16427511, essv16427338, essv16427428, essv16427548, essv16427650, essv16427201, essv16427146, essv16427474, essv16427639, essv16427155, essv16427295, essv16427552, essv16427245, essv16427573, essv16427600, essv16427663, essv16427357, essv16427174, essv16427342, essv16427346, essv16427382, essv16427438, essv16427365, essv16427401, essv16427383, essv16427288, essv16427191, essv16427444, essv16427369, essv16427431, essv16427260, essv16427243, essv16427252, essv16427337, essv16427142, essv16427228, essv16427202, essv16427432, essv16427479, essv16427390, essv16427353, essv16427129, essv16427486, essv16427607, essv16427595, essv16427324, essv16427567, essv16427646, essv16427508, essv16427343, essv16427448, essv16427177, essv16427335, essv16427576, essv16427445, essv16427405, essv16427356, essv16427580, essv16427140, essv16427610, essv16427121, essv16427465, essv16427249, essv16427147, essv16427501, essv16427263, essv16427619, essv16427163, essv16427133, essv16427350, essv16427128, essv16427652, essv16427487, essv16427435, essv16427443, essv16427491, essv16427276, essv16427312, essv16427161, essv16427209, essv16427434, essv16427270, essv16427223, essv16427210, essv16427470, essv16427534, essv16427644, essv16427333, essv16427517, essv16427207, essv16427271, essv16427303, essv16427316, essv16427138, essv16427436, essv16427494, essv16427586, essv16427523, essv16427221, essv16427123, essv16427310, essv16427126, essv16427258, essv16427440, essv16427313, essv16427135, essv16427318, essv16427366, essv16427334, essv16427467, essv16427149, essv16427151, essv16427232, essv16427284, essv16427200, essv16427588, essv16427509, essv16427302, essv16427248, essv16427515, essv16427224, essv16427490, essv16427563, essv16427520, essv16427460, essv16427330, essv16427180, essv16427422, essv16427360, essv16427277, essv16427531, essv16427525, essv16427189, essv16427408, essv16427647, essv16427589, essv16427482, essv16427473, essv16427136, essv16427457, essv16427281, essv16427240, essv16427533, essv16427449, essv16427631, essv16427471, essv16427616, essv16427638, essv16427575, essv16427394, essv16427629, essv16427236, essv16427213, essv16427593, essv16427657, essv16427442, essv16427622, essv16427387, essv16427453, essv16427516, essv16427244, essv16427547, essv16427561, essv16427601, essv16427526, essv16427469, essv16427176, essv16427539, essv16427602, essv16427577, essv16427462, essv16427259, essv16427165, essv16427429, essv16427368, essv16427311, essv16427278, essv16427555, essv16427283, essv16427656, essv16427604, essv16427305, essv16427247, essv16427214, essv16427413, essv16427557, essv16427427, essv16427139, essv16427173, essv16427132, essv16427581, essv16427268, essv16427417, essv16427285, essv16427605, essv16427348, essv16427633, essv16427322, essv16427506, essv16427195, essv16427611, essv16427421, essv16427513, essv16427168, essv16427433, essv16427216, essv16427157, essv16427190, essv16427131, essv16427632, essv16427186, essv16427397, essv16427512, essv16427361, essv16427603, essv16427530, essv16427500, essv16427193, essv16427352, essv16427355, essv16427477, essv16427158, essv16427134, essv16427528, essv16427565, essv16427170, essv16427446, essv16427218, essv16427272, essv16427599, essv16427204, essv16427598, essv16427641, essv16427524, essv16427299, essv16427496, essv16427505, essv16427564, essv16427162, essv16427409, essv16427287, essv16427504, essv16427651, essv16427653, essv16427542, essv16427345, essv16427568, essv16427395, essv16427273, essv16427169, essv16427230, essv16427267, essv16427472, essv16427265, essv16427319, essv16427235, essv16427400, essv16427553, essv16427635, essv16427344, essv16427264, essv16427331, essv16427483, essv16427648, essv16427430, essv16427294, essv16427380, essv16427566, essv16427571, essv16427498, essv16427229, essv16427649, essv16427521, essv16427423, essv16427358, essv16427159, essv16427425, essv16427464, essv16427336, essv16427419, essv16427351, essv16427536, essv16427211, essv16427410, essv16427363, essv16427412, essv16427661, essv16427560, essv16427375, essv16427376, essv16427540, essv16427558, essv16427630, essv16427184, essv16427388, essv16427666, essv16427549, essv16427175, essv16427637, essv16427596, essv16427251, essv16427164, essv16427261, essv16427384, essv16427634, essv16427655, essv16427253, essv16427145, essv16427510, essv16427662, essv16427171, essv16427391, essv16427543, essv16427392, essv16427396, essv16427415, essv16427379, essv16427308, essv16427658, essv16427203, essv16427503, essv16427188, essv16427535, essv16427215, essv16427402, essv16427125, essv16427623, essv16427562, essv16427451, essv16427584, essv16427493, essv16427609, essv16427275, essv16427582, essv16427570, essv16427222, essv16427297, essv16427225, essv16427447, essv16427241, essv16427541, essv16427502, essv16427301, essv16427645, essv16427590, essv16427150
SamplesHG01850, HG00650, HG01402, HG01918, HG00608, NA18947, NA19664, HG00384, HG01031, HG04222, NA21099, NA18979, HG00151, NA18999, NA18528, HG00729, HG02600, HG03616, HG02017, HG02050, HG03295, HG02382, HG02688, HG02356, NA20894, HG01873, NA19089, HG03770, HG00589, HG00122, HG02069, NA20589, NA18995, HG02140, NA20320, NA19678, HG00129, HG03736, HG01492, NA18960, NA18618, HG03874, HG00311, HG01859, HG02131, NA20759, HG00632, HG02389, HG02082, HG03947, HG01950, NA20412, HG04047, NA18985, HG00323, HG02409, HG01967, NA19789, HG02134, NA12777, NA18951, NA20892, NA18605, HG01847, HG03685, NA19056, HG04146, HG02142, HG01857, HG02380, HG03786, HG00657, HG03928, HG02253, NA19717, HG02084, HG01845, NA19081, HG03771, HG03775, NA18572, NA18948, HG01796, HG01630, NA20876, NA19064, HG03823, NA18537, HG00690, HG00404, HG02121, NA19750, HG02141, NA18532, NA19059, HG04063, HG00126, HG01811, HG03720, HG01858, HG03598, NA19440, HG03848, NA18533, HG04216, HG03875, HG03708, NA18628, HG02355, HG00580, NA12873, HG02391, HG01798, NA18943, HG02137, HG02188, HG03973, HG02133, HG01861, NA20897, HG00614, HG00478, NA18631, HG02401, HG02367, HG01804, HG03849, HG02116, HG03716, NA19770, HG02182, NA20826, HG04171, HG02947, NA18624, HG02351, HG03867, NA19065, HG03815, HG02406, HG01776, HG01618, NA18577, HG01507, HG00593, HG00235, HG01441, HG01795, NA19055, HG03652, NA19794, HG01303, HG03965, HG03731, HG03821, NA18561, HG04202, HG02275, HG01389, HG01374, HG00306, NA18603, HG02360, HG00699, HG02058, HG00452, NA18625, HG02394, NA18526, HG04001, HG02285, HG01809, NA18962, HG01924, HG01341, HG02312, HG00251, HG03706, HG03757, NA18595, HG00458, HG01710, HG01599, HG00634, HG01816, HG00736, NA19649, HG02655, NA19054, HG03911, HG03629, HG04131, HG01848, HG03762, HG01110, HG00590, HG03868, HG01893, HG00277, HG02003, NA19719, NA18560, HG03777, HG01892, NA19087, NA19002, HG03744, HG02138, HG03750, NA18973, HG03369, HG00530, HG00419, NA19451, HG00675, HG00464, NA19007, HG00543, HG02402, HG00188, HG03780, HG02166, HG02570, NA18613, HG00629, HG01360, NA19082, HG00982, NA20858, HG04225, NA20524, NA19077, HG00428, HG03760, HG01344, NA18644, NA18991, HG02076, HG00500, NA18976, HG04180, HG01852, NA19776, HG01392, HG01094, HG01414, NA19655, NA18946, NA19001, HG04189, HG03854, HG02081, HG01705, HG02725, NA06985, HG01403, HG01865, NA18536, HG03991, HG00445, HG04219, HG02684, HG04134, NA18535, NA19834, NA18952, NA18543, NA18559, NA19749, HG04239, NA18950, HG02064, NA19732, HG01362, HG03689, HG01598, HG01951, HG03012, HG01260, NA19786, HG03681, HG01801, HG00672, NA20868, HG00378, NA18987, HG01783, HG01085, HG02410, NA19726, HG01377, NA18984, HG00472, HG03611, NA19004, HG01863, HG04161, HG02343, HG01191, HG00437, NA20509, HG01976, HG02386, HG00542, NA12717, HG01462, HG02385, HG00671, NA19066, HG00559, HG02375, HG02026, HG02122, HG02029, HG02078, NA18959, HG01947, NA18602, NA18988, NA18627, HG03009, HG02792, HG00272, NA19319, HG04038, HG03016, HG02016, HG02185, NA18597, HG03754, NA19764, HG02105, HG00674, HG00599, HG02085, HG02301, NA18571, HG01840, NA20287, HG02603, HG02278, HG00867, HG02736, HG00325, HG02187, HG03888, HG01525, HG02190, NA19722, HG00118, NA18990, HG01198, HG01133, HG04075, HG00743, NA18645, NA18747, HG00443, NA19091, HG01171, NA19670, NA18525, HG02075, HG00557, HG03990, NA19086, HG04195, NA20314, HG00556, NA20862, NA18579, HG02522, HG03805, HG02165, HG01675, HG01029, HG04235, NA20525, NA20867, HG00651, HG00531, HG01870, HG00684, NA18912, HG00140, NA19752, HG03953, HG03971, HG00146, NA18963, HG00704, NA19012, HG03238, HG00407, NA19003, HG01812, NA18632, HG00625, HG01878, NA19072, HG02790, HG03695, HG03692, HG00734, NA20530, HG00473, HG02179, HG04099, HG03727, HG02019, HG02371, HG01086, HG04140, HG03066, HG03733, HG01846, NA19474, NA18636, HG00728, NA19900, HG02774, HG01807, HG02778, NA18623, NA20585, NA12154, NA18620, HG00881, NA21097, HG03237, HG01860, HG04211, NA19795, NA18545, NA19057, HG01944, HG01456, HG00566, HG02271, HG03792, HG02023, NA07357, HG03235, HG04100, NA18944, HG02153, HG01366, HG02155, HG03885, NA12283, NA19088, NA19782, NA18611, HG01455, NA18970, HG02512, HG01072, NA19731, HG01369, HG00422, NA18986, HG01440, HG01932, HG02104, HG02073, HG02180, HG03114, NA18648, HG00260, NA18614, NA10847, HG00313, NA20854, NA18544, HG03844, HG03908, HG01248, HG01187, HG03007, HG02025, HG01104, HG01864, HG00653, NA18956, HG00701, NA20895, NA18939, HG00533, HG02390, NA19658, HG01808, HG00708, NA18757, HG02364, NA18566, HG01073, NA19774, HG00956, HG04054, HG03974, HG00525, NA19740, HG03634, HG01890, HG02031, HG03774, NA18945, NA19436, NA18608, NA18542, NA18961, HG02049, HG02696, HG00623, NA18992, HG02685, NA19741, HG02139, NA19085, HG01862, HG02398, HG04023, NA18971, HG03789, HG03896, NA19060, HG00421, HG03863, HG02699, HG00656, HG02113, HG01817, HG00698, HG03894, HG02186, NA20528, HG01251, NA19661, HG01775, NA20763, HG01869, HG03931, HG03698, NA18622, HG00978, NA18562
Known GenesAPOBEC3A_B
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3647750
Frequency
Sample Size2504
Observed Gain0
Observed Loss546
Observed Complex0
Frequencyn/a


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