A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3647749



Internal ID6687803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr22:38964502..38966113hg38UCSC Ensembl
Innerchr22:38964509..38966106hg38UCSC Ensembl
Outerchr22:38964495..38966120hg38UCSC Ensembl
chr22:39360507..39362118hg19UCSC Ensembl
Innerchr22:39360514..39362111hg19UCSC Ensembl
Outerchr22:39360500..39362125hg19UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg381612
hg191612
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16426882, essv16426625, essv16426934, essv16426902, essv16426707, essv16426697, essv16426783, essv16426693, essv16426950, essv16427052, essv16426758, essv16426965, essv16426947, essv16426929, essv16426717, essv16426594, essv16426963, essv16426918, essv16426488, essv16426680, essv16427116, essv16426901, essv16427024, essv16426833, essv16426586, essv16426819, essv16426777, essv16426752, essv16426876, essv16426524, essv16427012, essv16426538, essv16427100, essv16426683, essv16426973, essv16426853, essv16426694, essv16426635, essv16426786, essv16426682, essv16426977, essv16426610, essv16427006, essv16426988, essv16426658, essv16426954, essv16426534, essv16427048, essv16426651, essv16426808, essv16426494, essv16426871, essv16426514, essv16426796, essv16426733, essv16427063, essv16426888, essv16426915, essv16426699, essv16426520, essv16426730, essv16426554, essv16426702, essv16426659, essv16426660, essv16426689, essv16427079, essv16426674, essv16426878, essv16426604, essv16426861, essv16427032, essv16426686, essv16426539, essv16426804, essv16426750, essv16427106, essv16427003, essv16426540, essv16426736, essv16427078, essv16426691, essv16426513, essv16426612, essv16426672, essv16426714, essv16426695, essv16426692, essv16427005, essv16426638, essv16427039, essv16427000, essv16427110, essv16426814, essv16427098, essv16426967, essv16426743, essv16426664, essv16426774, essv16426886, essv16426762, essv16427097, essv16426917, essv16426939, essv16426803, essv16426773, essv16426760, essv16427051, essv16426842, essv16427029, essv16427120, essv16426564, essv16427001, essv16426740, essv16427088, essv16426531, essv16426731, essv16426509, essv16427091, essv16426581, essv16426974, essv16426839, essv16427059, essv16426521, essv16426776, essv16426995, essv16426633, essv16426584, essv16426603, essv16426922, essv16426885, essv16426955, essv16426549, essv16426550, essv16426829, essv16426884, essv16427071, essv16426642, essv16426506, essv16426557, essv16426511, essv16426986, essv16426606, essv16426772, essv16426887, essv16426571, essv16426921, essv16426854, essv16426639, essv16426996, essv16426987, essv16426588, essv16426654, essv16426582, essv16426729, essv16426890, essv16426491, essv16426652, essv16426869, essv16426529, essv16426836, essv16426794, essv16426990, essv16426646, essv16427011, essv16426840, essv16426933, essv16426872, essv16426895, essv16427068, essv16427045, essv16426592, essv16427114, essv16426865, essv16426663, essv16426559, essv16426599, essv16426649, essv16427084, essv16426835, essv16426555, essv16426623, essv16426846, essv16426751, essv16427061, essv16426779, essv16426490, essv16427023, essv16426983, essv16426643, essv16426677, essv16426675, essv16427103, essv16426755, essv16426526, essv16427118, essv16426522, essv16426868, essv16426834, essv16426781, essv16426880, essv16426576, essv16427119, essv16427042, essv16426630, essv16427026, essv16427044, essv16426883, essv16426789, essv16426574, essv16426923, essv16426668, essv16426671, essv16426579, essv16427060, essv16426744, essv16427109, essv16426940, essv16426662, essv16426908, essv16426591, essv16427066, essv16427021, essv16427056, essv16426855, essv16427101, essv16426541, essv16426795, essv16427077, essv16427095, essv16426558, essv16427009, essv16427018, essv16426979, essv16426822, essv16426684, essv16427099, essv16426867, essv16427055, essv16426655, essv16426527, essv16426735, essv16426551, essv16426820, essv16427073, essv16426792, essv16426770, essv16426753, essv16426687, essv16426916, essv16427104, essv16426849, essv16426992, essv16426790, essv16427008, essv16426601, essv16427007, essv16427004, essv16426961, essv16426825, essv16426991, essv16427014, essv16427058, essv16426757, essv16426877, essv16426561, essv16426809, essv16426827, essv16426732, essv16426727, essv16427089, essv16426859, essv16426881, essv16426943, essv16427050, essv16426864, essv16426952, essv16426512, essv16426631, essv16426533, essv16426548, essv16426919, essv16426632, essv16427092, essv16426925, essv16426552, essv16426748, essv16426913, essv16426656, essv16426600, essv16426862, essv16426906, essv16426852, essv16427043, essv16426894, essv16426619, essv16426821, essv16426495, essv16426972, essv16426553, essv16427082, essv16426700, essv16427085, essv16426912, essv16426845, essv16426873, essv16426657, essv16426904, essv16427020, essv16426780, essv16426993, essv16426508, essv16427108, essv16426510, essv16426893, essv16426739, essv16426598, essv16426944, essv16426542, essv16426875, essv16426958, essv16426745, essv16426832, essv16427054, essv16426723, essv16426891, essv16426826, essv16426503, essv16426806, essv16426766, essv16426505, essv16426956, essv16427070, essv16427105, essv16426487, essv16426813, essv16426679, essv16426496, essv16426858, essv16426516, essv16427028, essv16426641, essv16426665, essv16426602, essv16426670, essv16426899, essv16426690, essv16427036, essv16427069, essv16426595, essv16426573, essv16426761, essv16426850, essv16426800, essv16427027, essv16426785, essv16426492, essv16427111, essv16426637, essv16426605, essv16426566, essv16427074, essv16426709, essv16426926, essv16426575, essv16426856, essv16426932, essv16427112, essv16426948, essv16426903, essv16426546, essv16426614, essv16426937, essv16426567, essv16426742, essv16426897, essv16426710, essv16427093, essv16426609, essv16426866, essv16426953, essv16426648, essv16427076, essv16426749, essv16426715, essv16426724, essv16426818, essv16426696, essv16427002, essv16426556, essv16426688, essv16426560, essv16426725, essv16426486, essv16426843, essv16426669, essv16426844, essv16426870, essv16426547, essv16426568, essv16426811, essv16426498, essv16426914, essv16426807, essv16426721, essv16426754, essv16426585, essv16426667, essv16426578, essv16426968, essv16426763, essv16426900, essv16426848, essv16426666, essv16426994, essv16426738, essv16426626, essv16426627, essv16426563, essv16426909, essv16426720, essv16426930, essv16426676, essv16427065, essv16426931, essv16426562, essv16426504, essv16426841, essv16426489, essv16426999, essv16426589, essv16426830, essv16426936, essv16426824, essv16426618, essv16426975, essv16427113, essv16426640, essv16426507, essv16426962, essv16426860, essv16426644, essv16427094, essv16427117, essv16426997, essv16426985, essv16426746, essv16427067, essv16426946, essv16426537, essv16426530, essv16426500, essv16426704, essv16426815, essv16426519, essv16426823, essv16426577, essv16426747, essv16426685, essv16426851, essv16426703, essv16426857, essv16426911, essv16426892, essv16426645, essv16426838, essv16426499, essv16427031, essv16426782, essv16426874, essv16427090, essv16426966, essv16426647, essv16426593, essv16426629, essv16427049, essv16426497, essv16426989, essv16426532, essv16426941, essv16427017, essv16426705, essv16426767, essv16426583, essv16426801, essv16426580, essv16427033, essv16426771, essv16426493, essv16426984, essv16426608, essv16426620, essv16426728, essv16426624, essv16426737, essv16426957, essv16426775, essv16427087, essv16427053, essv16426837, essv16427064, essv16426726, essv16426570, essv16426713, essv16426769, essv16426847, essv16426569, essv16426615, essv16426613, essv16426960, essv16426617, essv16427086, essv16427083, essv16426788, essv16426719, essv16426799, essv16426611, essv16426621, essv16427038, essv16427046, essv16427047, essv16427075, essv16427035, essv16426964, essv16427080, essv16427062, essv16426793, essv16426942, essv16426817, essv16426959, essv16426673, essv16426816, essv16426924, essv16427016, essv16426898, essv16426636, essv16427030, essv16426759, essv16426928, essv16426951, essv16427015, essv16426572, essv16426935, essv16426587, essv16426971, essv16426525, essv16426653, essv16426910, essv16426734, essv16426545, essv16426945, essv16426622, essv16426768, essv16427115, essv16426741, essv16426970, essv16426764, essv16426976, essv16426756, essv16426711, essv16426712, essv16427081, essv16426502, essv16427041, essv16426596, essv16426812, essv16426927, essv16426905, essv16426765, essv16427072, essv16426981, essv16426980, essv16426681, essv16426678, essv16426831, essv16426938, essv16426778, essv16426517, essv16426536, essv16426802, essv16426616, essv16427057, essv16426628, essv16426515, essv16426982, essv16427040, essv16426523, essv16426698, essv16426978, essv16426718, essv16427019, essv16426907, essv16427102, essv16427107, essv16427010, essv16426535, essv16426706, essv16426518, essv16426590, essv16426701, essv16426722, essv16426661, essv16426708, essv16426920, essv16427034, essv16426889, essv16427037, essv16426787, essv16427013, essv16427096, essv16426634, essv16426784, essv16427022, essv16426565, essv16426828, essv16426998, essv16427025, essv16426810, essv16426716, essv16426501, essv16426607, essv16426969, essv16426949, essv16426650, essv16426797, essv16426896, essv16426798, essv16426543, essv16426528, essv16426791, essv16426863, essv16426805, essv16426879, essv16426597, essv16426544
SamplesHG01850, HG00650, HG01402, HG01918, HG00608, NA18947, HG01443, NA19664, HG00384, NA19399, HG01031, HG04222, NA21099, NA11931, NA18979, HG00151, NA18999, NA18528, HG00729, HG02600, HG03616, HG02017, HG01486, NA18878, HG02050, HG03295, HG02382, HG03515, HG02688, HG02356, NA20894, NA12813, HG00717, HG01873, NA19089, HG03770, HG00589, HG00122, HG02069, NA20589, NA18995, HG02140, NA20320, NA19678, HG00129, HG03913, HG03736, NA18960, NA18618, HG03874, HG00311, HG00243, HG03917, HG01859, HG02131, NA20759, HG04183, HG00632, HG01519, HG02389, HG02082, HG03947, HG01950, NA20412, HG04047, NA18985, HG00323, HG02409, HG01967, NA19789, HG02134, NA12777, NA18951, NA20892, NA18605, HG01847, HG03132, HG03685, NA19070, NA19056, HG04146, HG02142, HG01857, NA19175, HG02380, HG03786, HG00657, HG03928, HG02253, NA19717, HG02084, HG01845, NA19081, HG03771, HG03775, NA18572, NA18948, HG01796, HG01630, NA20876, NA19064, HG03823, NA18537, HG00690, HG00404, HG02121, NA19750, HG02141, NA18532, NA19059, HG04063, NA18523, HG03752, HG00126, HG03694, HG01811, HG03720, HG01858, HG03598, NA19440, HG03848, NA18533, HG04216, HG03875, HG03708, NA18628, HG02355, HG00580, NA12873, HG02391, HG01798, NA18943, NA12763, HG02137, HG02188, HG03973, HG02133, HG01861, NA20897, HG03600, HG00614, HG00478, NA18631, HG02401, HG02367, HG01804, HG03849, HG02116, HG03716, HG04098, NA19770, HG02182, NA20826, HG04171, HG02947, NA18624, HG02351, HG03867, HG03198, NA19065, HG03815, HG02406, HG01618, HG01507, HG00593, HG00235, HG03559, HG01795, HG01054, NA19055, HG03652, NA19794, NA19397, HG01303, HG03965, HG03731, HG03821, NA18561, HG04202, NA18507, HG02275, HG01389, HG01374, HG00306, NA18641, NA18603, HG02360, HG04094, HG00699, HG02058, HG00452, NA18625, HG02394, NA18526, HG04001, HG02285, HG01809, NA18962, HG01924, HG01341, HG02312, HG00251, HG03706, HG03757, NA18595, HG00458, HG01710, HG01599, HG00634, HG01816, HG00736, NA19649, HG02655, NA19054, HG03911, HG03629, HG04131, HG01848, HG03762, HG01110, HG00590, HG03868, HG01893, HG01134, NA18749, HG00277, HG02003, NA19719, NA18560, HG03777, HG01892, NA19087, NA19002, HG03744, HG02138, HG03750, NA18973, HG03369, HG00530, HG00419, NA19451, HG00675, HG00464, NA19007, HG00543, HG02402, HG00188, HG03780, HG02166, HG00560, NA18613, HG00629, HG01360, NA19082, HG00982, NA20858, HG04225, NA20524, NA19077, HG00428, HG03760, HG01344, NA18644, NA18991, HG02076, NA19982, HG02307, HG00500, NA18976, HG04180, HG01852, NA19776, HG01392, HG01414, NA19655, NA18946, NA19001, HG04189, HG01842, HG03854, HG02081, HG01705, HG02725, NA06985, HG01403, HG01865, NA18536, HG03991, HG00445, HG03866, HG04219, HG02684, HG04134, NA18535, NA19834, NA19108, NA18952, NA18543, NA18559, NA19749, HG04239, NA18950, HG02064, NA19732, HG01362, HG01253, HG03689, HG01598, HG01951, HG03012, NA20504, HG01260, NA19786, HG03681, HG01801, NA19759, HG00707, HG00672, NA20868, HG00378, NA18987, HG01783, HG01085, HG02410, NA19726, HG01377, NA18984, HG00472, HG03611, NA19004, HG01863, HG04161, HG00759, HG02629, HG02343, HG01191, HG00437, NA20509, HG01976, HG01747, HG02386, HG00542, NA12717, HG02481, HG01462, HG02385, HG00671, NA19066, NA19204, HG00559, HG02375, HG02026, HG00766, HG02122, HG02029, HG02078, HG00244, NA18959, HG01947, HG02384, NA18602, HG04156, NA18988, NA18627, HG03009, HG02792, HG00272, NA19319, HG04038, HG03016, HG02016, HG02185, NA18597, HG03754, NA19764, HG02105, HG00674, HG00599, HG02383, HG02085, HG02301, NA18571, NA21108, HG01840, HG00334, NA20287, HG02603, HG02278, HG00867, HG02736, HG00325, HG02187, HG03888, HG01525, HG02190, NA19722, HG00118, NA18990, HG01133, HG02623, HG04075, NA20318, HG00743, NA18645, NA18747, HG00443, HG03861, NA19091, HG01435, HG01171, NA19670, NA18525, HG02075, HG00332, HG00557, HG03990, NA19086, HG04195, HG00101, NA20314, HG00556, NA20862, NA18579, HG02522, HG03805, HG02165, HG01675, HG01029, HG04235, NA20525, NA20867, HG00651, HG00531, HG01870, HG00684, NA18912, HG01101, HG00140, NA19752, HG03953, HG03971, HG00146, NA18963, HG03672, HG00704, NA18570, NA19012, HG03238, HG00407, NA19003, HG01812, NA18632, HG00625, HG01878, NA19072, HG02790, HG03695, HG03692, HG00734, NA19090, NA20530, HG01375, HG03259, HG00473, HG02179, HG04099, HG01137, HG03727, HG02019, HG02371, HG01086, HG04140, HG03066, HG03733, HG01846, NA19474, NA18636, HG00310, HG00728, NA19900, HG02774, HG01807, HG02778, NA18968, NA12006, NA18623, NA20585, NA12154, HG04153, NA18620, HG00881, NA21097, HG03237, HG01860, HG00187, HG04211, HG02337, NA19795, NA18545, NA19393, NA19057, HG01944, HG01456, HG00566, HG03667, HG02271, HG03792, HG00177, HG00879, HG02023, HG00327, HG03235, HG04100, NA18944, HG02153, HG01366, HG03135, HG00448, HG02155, NA20317, HG03885, NA12283, NA19088, NA19782, NA18611, HG01455, NA18970, HG02512, HG02067, HG01072, NA19731, HG01369, HG00422, NA19317, NA18986, HG01440, HG01932, HG04185, HG02104, HG02073, HG02180, HG03114, NA18648, HG00260, NA18614, NA10847, HG00313, NA20854, NA18544, HG03844, HG03908, HG01248, HG01187, HG03007, HG01595, HG00328, HG02025, HG01104, HG01864, HG00653, NA18956, HG00701, NA20895, NA18939, HG00436, HG00533, HG02390, HG00598, NA18637, NA19658, HG02102, HG01808, HG00708, NA18757, HG02364, NA18566, HG01073, HG03871, NA19774, HG03136, HG00956, HG04054, HG03974, HG00525, NA19740, HG03634, HG00276, HG01890, HG02031, HG03774, NA18634, NA18945, NA19436, NA18608, HG01444, NA18542, NA18961, HG02049, HG02696, HG02923, HG00623, NA18992, HG02685, NA19741, HG02139, NA19085, HG01862, HG02398, HG04023, NA18971, HG03789, HG03896, NA19060, HG00421, HG03863, HG02699, HG00656, HG02113, HG03410, HG01817, HG00698, HG03894, HG02186, NA20528, HG01251, NA19661, HG01775, NA20763, HG01869, HG03931, HG03698, NA18622, HG00978, HG00362, NA18562
Known GenesAPOBEC3A_B
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3647749
Frequency
Sample Size2504
Observed Gain0
Observed Loss635
Observed Complex0
Frequencyn/a


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