A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3647746



Internal ID6687800
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr22:38961689..38992569hg38UCSC Ensembl
Innerchr22:38962189..38992069hg38UCSC Ensembl
Outerchr22:38960689..38993569hg38UCSC Ensembl
chr22:39357694..39388574hg19UCSC Ensembl
Innerchr22:39358194..39388074hg19UCSC Ensembl
Outerchr22:39356694..39389574hg19UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg3830881
hg1930881
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16425624, essv16425356, essv16425321, essv16425797, essv16425757, essv16425267, essv16425595, essv16425223, essv16425242, essv16425425, essv16425709, essv16425619, essv16425520, essv16425488, essv16425392, essv16425407, essv16425588, essv16425341, essv16425258, essv16425822, essv16425369, essv16425675, essv16425545, essv16425209, essv16425622, essv16425759, essv16425674, essv16425423, essv16425278, essv16425296, essv16425299, essv16425548, essv16425434, essv16425318, essv16425571, essv16425415, essv16425367, essv16425283, essv16425388, essv16425701, essv16425555, essv16425670, essv16425611, essv16425811, essv16425414, essv16425634, essv16425538, essv16425442, essv16425691, essv16425286, essv16425221, essv16425346, essv16425810, essv16425430, essv16425676, essv16425720, essv16425431, essv16425498, essv16425788, essv16425428, essv16425389, essv16425570, essv16425817, essv16425591, essv16425426, essv16425213, essv16425654, essv16425566, essv16425814, essv16425284, essv16425401, essv16425633, essv16425384, essv16425309, essv16425577, essv16425792, essv16425779, essv16425717, essv16425219, essv16425511, essv16425381, essv16425731, essv16425725, essv16425371, essv16425801, essv16425605, essv16425627, essv16425268, essv16425637, essv16425763, essv16425598, essv16425194, essv16425689, essv16425476, essv16425812, essv16425613, essv16425412, essv16425340, essv16425750, essv16425235, essv16425383, essv16425440, essv16425372, essv16425302, essv16425573, essv16425375, essv16425210, essv16425460, essv16425361, essv16425439, essv16425427, essv16425486, essv16425262, essv16425397, essv16425298, essv16425778, essv16425565, essv16425677, essv16425474, essv16425231, essv16425207, essv16425472, essv16425358, essv16425248, essv16425391, essv16425282, essv16425364, essv16425620, essv16425723, essv16425558, essv16425549, essv16425602, essv16425312, essv16425496, essv16425291, essv16425211, essv16425796, essv16425251, essv16425807, essv16425825, essv16425305, essv16425724, essv16425438, essv16425252, essv16425510, essv16425821, essv16425735, essv16425227, essv16425413, essv16425456, essv16425506, essv16425314, essv16425270, essv16425405, essv16425576, essv16425481, essv16425706, essv16425398, essv16425616, essv16425239, essv16425303, essv16425678, essv16425273, essv16425241, essv16425329, essv16425196, essv16425775, essv16425574, essv16425249, essv16425767, essv16425698, essv16425304, essv16425449, essv16425671, essv16425218, essv16425437, essv16425643, essv16425402, essv16425337, essv16425569, essv16425197, essv16425509, essv16425263, essv16425645, essv16425378, essv16425313, essv16425632, essv16425290, essv16425667, essv16425308, essv16425658, essv16425762, essv16425288, essv16425747, essv16425780, essv16425317, essv16425386, essv16425269, essv16425734, essv16425204, essv16425727, essv16425560, essv16425789, essv16425403, essv16425447, essv16425740, essv16425781, essv16425497, essv16425610, essv16425683, essv16425215, essv16425393, essv16425791, essv16425816, essv16425635, essv16425593, essv16425266, essv16425216, essv16425531, essv16425374, essv16425505, essv16425461, essv16425756, essv16425238, essv16425774, essv16425254, essv16425600, essv16425704, essv16425785, essv16425601, essv16425416, essv16425409, essv16425342, essv16425589, essv16425690, essv16425295, essv16425406, essv16425657, essv16425418, essv16425557, essv16425685, essv16425435, essv16425809, essv16425728, essv16425819, essv16425432, essv16425495, essv16425271, essv16425410, essv16425503, essv16425226, essv16425536, essv16425390, essv16425640, essv16425631, essv16425730, essv16425333, essv16425688, essv16425644, essv16425463, essv16425820, essv16425794, essv16425583, essv16425590, essv16425396, essv16425516, essv16425245, essv16425526, essv16425754, essv16425504, essv16425422, essv16425699, essv16425246, essv16425733, essv16425250, essv16425715, essv16425564, essv16425370, essv16425489, essv16425578, essv16425366, essv16425228, essv16425331, essv16425603, essv16425696, essv16425399, essv16425468, essv16425459, essv16425198, essv16425518, essv16425612, essv16425618, essv16425466, essv16425666, essv16425203, essv16425450, essv16425782, essv16425411, essv16425230, essv16425522, essv16425350, essv16425477, essv16425382, essv16425656, essv16425697, essv16425556, essv16425646, essv16425655, essv16425680, essv16425320, essv16425261, essv16425528, essv16425275, essv16425804, essv16425597, essv16425692, essv16425718, essv16425572, essv16425790, essv16425703, essv16425559, essv16425550, essv16425527, essv16425507, essv16425200, essv16425234, essv16425732, essv16425478, essv16425417, essv16425446, essv16425256, essv16425347, essv16425738, essv16425702, essv16425220, essv16425604, essv16425348, essv16425562, essv16425323, essv16425452, essv16425322, essv16425513, essv16425214, essv16425287, essv16425726, essv16425352, essv16425561, essv16425771, essv16425315, essv16425585, essv16425419, essv16425470, essv16425650, essv16425693, essv16425745, essv16425192, essv16425453, essv16425682, essv16425232, essv16425716, essv16425729, essv16425501, essv16425484, essv16425684, essv16425394, essv16425300, essv16425628, essv16425707, essv16425462, essv16425424, essv16425502, essv16425534, essv16425660, essv16425517, essv16425237, essv16425808, essv16425490, essv16425240, essv16425458, essv16425609, essv16425272, essv16425451, essv16425546, essv16425687, essv16425465, essv16425652, essv16425773, essv16425638, essv16425784, essv16425664, essv16425324, essv16425206, essv16425499, essv16425521, essv16425636, essv16425443, essv16425515, essv16425280, essv16425581, essv16425377, essv16425191, essv16425799, essv16425679, essv16425777, essv16425445, essv16425532, essv16425642, essv16425373, essv16425651, essv16425379, essv16425722, essv16425319, essv16425766, essv16425310, essv16425793, essv16425599, essv16425823, essv16425647, essv16425623, essv16425567, essv16425325, essv16425540, essv16425473, essv16425575, essv16425544, essv16425818, essv16425563, essv16425360, essv16425694, essv16425542, essv16425700, essv16425326, essv16425592, essv16425328, essv16425721, essv16425662, essv16425512, essv16425539, essv16425659, essv16425760, essv16425739, essv16425257, essv16425293, essv16425708, essv16425353, essv16425614, essv16425541, essv16425349, essv16425339, essv16425224, essv16425357, essv16425524, essv16425316, essv16425748, essv16425508, essv16425294, essv16425487, essv16425533, essv16425292, essv16425547, essv16425695, essv16425530, essv16425380, essv16425806, essv16425744, essv16425584, essv16425639, essv16425673, essv16425751, essv16425441, essv16425265, essv16425327, essv16425786, essv16425661, essv16425761, essv16425454, essv16425719, essv16425289, essv16425626, essv16425259, essv16425737, essv16425743, essv16425253, essv16425363, essv16425480, essv16425686, essv16425334, essv16425537, essv16425776, essv16425385, essv16425552, essv16425311, essv16425802, essv16425217, essv16425455, essv16425307, essv16425523, essv16425579, essv16425681, essv16425543, essv16425800, essv16425482, essv16425746, essv16425596, essv16425485, essv16425395, essv16425553, essv16425630, essv16425457, essv16425621, essv16425586, essv16425519, essv16425260, essv16425826, essv16425376, essv16425274, essv16425336, essv16425344, essv16425467, essv16425641, essv16425712, essv16425212, essv16425815, essv16425195, essv16425335, essv16425420, essv16425404, essv16425387, essv16425594, essv16425483, essv16425769, essv16425343, essv16425615, essv16425433, essv16425768, essv16425787, essv16425229, essv16425479, essv16425359, essv16425421, essv16425783, essv16425400, essv16425629, essv16425494, essv16425649, essv16425753, essv16425475, essv16425554, essv16425243, essv16425279, essv16425471, essv16425795, essv16425368, essv16425617, essv16425233, essv16425764, essv16425492, essv16425201, essv16425742, essv16425408, essv16425607, essv16425351, essv16425264, essv16425281, essv16425444, essv16425500, essv16425193, essv16425705, essv16425606, essv16425568, essv16425710, essv16425535, essv16425529, essv16425354, essv16425765, essv16425803, essv16425587, essv16425208, essv16425665, essv16425805, essv16425653, essv16425582, essv16425297, essv16425429, essv16425798, essv16425551, essv16425362, essv16425736, essv16425469, essv16425648, essv16425345, essv16425244, essv16425202, essv16425365, essv16425247, essv16425663, essv16425199, essv16425770, essv16425711, essv16425306, essv16425625, essv16425608, essv16425255, essv16425713, essv16425668, essv16425225, essv16425355, essv16425277, essv16425514, essv16425205, essv16425749, essv16425236, essv16425332, essv16425493, essv16425448, essv16425672, essv16425276, essv16425222, essv16425464, essv16425758, essv16425525, essv16425301, essv16425772, essv16425285, essv16425752, essv16425580, essv16425824, essv16425755, essv16425714, essv16425813, essv16425338, essv16425491, essv16425330, essv16425741, essv16425436, essv16425669
SamplesHG01850, HG00650, HG01402, HG01918, HG00608, NA18947, HG01443, NA19664, HG00384, NA19399, HG01031, HG04222, NA21099, NA11931, NA18979, HG00151, NA18999, NA18528, HG00729, HG02600, HG03616, HG02017, HG01486, NA18878, HG02050, HG03295, HG02382, HG03515, HG02688, HG02356, NA20894, NA12813, HG00717, HG01873, NA19089, HG03770, HG00589, HG00122, HG02069, NA20589, NA18995, HG02140, NA20320, NA19678, HG00129, HG03913, HG03736, HG01492, NA18960, NA18618, HG03874, HG00311, HG00243, HG03917, HG01859, HG02131, NA20759, HG04183, HG00632, HG01519, HG02389, HG02082, HG03947, HG01950, NA20412, HG04047, NA18985, HG00323, HG02409, HG01967, NA19789, HG02134, NA12777, NA18951, NA20892, NA18605, HG01847, HG03132, HG03685, NA19056, HG04146, HG02142, HG01857, NA19175, HG02380, HG03786, HG00657, HG03928, HG02253, NA19717, HG02084, HG01845, NA19081, HG03771, HG03775, NA18572, NA18948, HG01796, HG01630, NA20876, NA19064, HG03823, NA18537, HG00690, HG00404, HG02121, NA19750, HG02141, NA18532, NA19059, HG04063, NA18523, HG03752, HG00126, HG03694, HG01811, HG03720, HG01858, HG03598, NA19652, NA19440, HG03848, NA18533, HG04216, HG03875, HG03708, NA18628, HG02355, HG00580, NA12873, HG02391, HG01798, NA18943, NA12763, HG02137, HG02188, HG03973, HG02133, HG01861, NA20897, NA19328, HG03600, HG00614, HG00478, NA18631, HG02401, HG02367, HG01804, HG03849, HG02116, HG03716, HG04098, NA19770, HG02182, NA20826, HG04171, HG02947, NA18624, HG02351, HG03867, HG03198, NA19065, HG03815, HG02406, HG01618, HG01507, HG00593, HG00235, HG03559, HG01441, HG01795, HG01054, NA19055, HG03652, NA19794, NA19397, HG01303, HG03965, HG03731, HG03821, NA18561, HG04202, NA18507, HG02275, HG01389, HG01374, HG00306, NA18603, HG02360, HG04094, HG00699, HG02058, HG00452, NA18625, HG02394, NA18526, HG04001, HG02285, HG01809, NA18962, HG01924, HG01341, HG02312, HG00251, HG03706, HG03757, NA18595, HG00458, HG01710, HG01599, HG00634, HG01816, HG00736, NA19649, HG02655, NA19054, HG03911, HG03629, HG04131, HG01848, HG03762, HG01110, HG00590, HG03868, HG01893, HG01134, NA18749, HG00277, HG02003, NA19719, NA18560, HG03777, HG01892, NA19087, NA19002, HG03744, HG02138, HG03750, NA18973, HG03369, HG00530, HG00419, NA19451, HG00675, HG00464, NA19007, HG00543, HG02402, HG00188, HG03780, HG02166, HG00560, HG02570, NA18613, HG00629, HG01360, NA19082, HG00982, NA20858, HG04225, NA20524, NA19077, HG00428, HG03760, HG01344, NA18644, NA18991, HG02076, NA19982, HG02307, HG00500, NA18976, HG04180, HG01852, NA19776, HG01392, HG01414, NA19655, NA18946, NA19001, HG04189, HG01842, HG03854, HG02081, HG01705, HG02725, NA06985, HG01403, HG01865, NA18536, HG03991, HG00445, HG03866, HG04219, HG02684, HG04134, NA18535, NA19834, NA19108, NA18952, NA18543, NA18559, NA19749, HG04239, NA18950, HG02064, NA19732, HG01362, HG01253, HG03689, HG01598, HG01951, HG03012, NA20504, HG01260, NA19786, HG03681, HG01801, NA19759, HG00707, HG00672, NA20868, HG00378, NA18987, HG01783, HG01085, HG02410, NA19726, HG01377, NA18984, HG00472, HG03611, NA19004, HG01863, HG04161, HG02629, HG02343, HG01191, HG00437, NA20509, HG01976, HG01747, HG02386, HG00542, NA12717, HG02481, HG01462, HG02385, HG00671, NA19066, NA19204, HG00559, HG02375, HG02026, HG02122, HG02029, HG02078, HG00244, NA18959, HG01947, HG02384, NA18602, HG04156, NA18988, NA18627, HG03009, HG02792, HG00272, NA19319, HG04038, HG03016, HG02016, HG02185, NA18597, HG03754, NA19764, HG02105, HG00674, HG00599, HG02085, HG02301, NA18571, NA21108, HG01840, HG00334, NA20287, HG02603, HG02278, HG00867, HG02736, HG00325, HG02187, NA19372, HG03888, HG01525, HG02190, NA19722, HG00118, NA18990, HG01133, HG02623, HG04075, NA20318, HG00743, NA18645, NA19908, NA18747, HG00443, HG03861, NA19091, HG03363, HG01435, HG01171, NA19670, NA18525, HG02075, HG00332, HG00557, HG03990, NA19086, HG04195, HG00101, NA20314, HG00556, NA20862, NA18579, HG02522, HG03805, HG02165, HG01675, HG01029, HG04235, NA20525, NA20867, HG00651, HG00531, HG01870, HG00684, NA18912, HG01101, HG00140, NA19752, HG03953, HG03971, HG00146, NA18963, HG03672, HG00704, NA19012, HG03238, HG00407, NA19003, HG01812, NA18632, HG00625, HG01878, NA19072, HG02790, HG03695, HG03692, HG00734, NA20530, HG01375, HG03259, HG00473, HG02179, HG04099, HG01137, HG03727, HG02019, HG02371, HG01086, HG04140, HG03066, HG03733, HG01846, NA19474, NA18636, HG00310, HG00728, NA19900, HG02774, HG01807, HG02778, NA18968, NA12006, NA18623, NA20585, NA12154, HG04153, NA18620, HG00881, NA21097, HG03237, HG01860, HG00187, HG04211, HG02337, NA19795, NA18545, NA19393, NA19057, HG01944, HG01456, HG00566, HG03667, HG02271, HG03792, HG00177, HG00879, HG02023, HG00327, HG03235, HG04100, NA18944, HG02153, HG01366, HG03135, HG02155, NA20317, HG03885, NA12283, NA19088, NA19782, NA18611, HG01455, NA18970, HG02512, HG02067, HG01072, NA19731, HG01369, HG00422, NA19317, NA18986, HG01440, HG01932, HG04185, HG02104, HG02073, HG02180, HG03114, NA18648, HG00260, NA18614, NA10847, HG00313, NA20854, NA18544, HG03844, HG03908, HG01248, HG01187, NA18934, HG03007, HG01595, HG00328, HG02025, HG01104, HG01864, HG00653, NA18956, HG00701, NA20895, NA18939, HG00320, HG00533, HG02390, HG00598, NA19658, HG02102, HG01808, HG00708, NA18757, HG02364, HG01390, NA18566, HG01073, HG03871, NA19774, HG03136, HG00956, HG04054, HG03974, HG00525, NA19740, HG03634, HG00276, HG01890, HG02031, HG03774, NA18634, NA18945, NA19436, NA18608, HG01444, NA18542, NA18961, HG02049, HG02696, HG02923, HG00623, NA18992, HG02685, NA19741, HG02139, NA19085, HG01862, HG02398, HG04023, NA18971, HG03789, HG03896, NA19060, HG00421, HG03863, HG02699, HG00656, HG02113, HG03410, HG01817, HG00698, HG03894, HG02186, NA20528, HG01251, NA19661, HG01775, NA20763, HG01869, HG03931, HG03698, NA18622, HG00978, HG00362, NA18562
Known GenesAPOBEC3A, APOBEC3A_B, APOBEC3B, APOBEC3B-AS1
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3647746
Frequency
Sample Size2504
Observed Gain0
Observed Loss636
Observed Complex0
Frequencyn/a


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