A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3646802



Internal ID6686859
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr21:29614511..29615395hg38UCSC Ensembl
Innerchr21:29614511..29615395hg38UCSC Ensembl
Outerchr21:29614150..29615732hg38UCSC Ensembl
chr21:30986831..30987715hg19UCSC Ensembl
Innerchr21:30986831..30987715hg19UCSC Ensembl
Outerchr21:30986470..30988052hg19UCSC Ensembl
Cytoband21q21.3
Allele length
AssemblyAllele length
hg38885
hg19885
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16309674, essv16309608, essv16309649, essv16309654, essv16309672, essv16309659, essv16309605, essv16309637, essv16309634, essv16309630, essv16309645, essv16309667, essv16309675, essv16309671, essv16309642, essv16309666, essv16309602, essv16309618, essv16309609, essv16309596, essv16309639, essv16309599, essv16309625, essv16309646, essv16309669, essv16309640, essv16309652, essv16309610, essv16309611, essv16309627, essv16309670, essv16309665, essv16309600, essv16309638, essv16309626, essv16309636, essv16309607, essv16309676, essv16309606, essv16309613, essv16309653, essv16309598, essv16309662, essv16309623, essv16309632, essv16309641, essv16309673, essv16309660, essv16309604, essv16309668, essv16309624, essv16309621, essv16309594, essv16309631, essv16309658, essv16309597, essv16309615, essv16309663, essv16309614, essv16309655, essv16309620, essv16309643, essv16309616, essv16309651, essv16309661, essv16309644, essv16309628, essv16309601, essv16309650, essv16309619, essv16309612, essv16309657, essv16309603, essv16309622, essv16309617, essv16309648, essv16309656, essv16309629, essv16309664, essv16309647, essv16309633, essv16309595, essv16309635
SamplesHG01985, NA20339, HG03559, NA19222, NA18924, HG02481, NA19909, HG01443, HG02836, NA19350, HG02804, HG03521, NA18878, HG03515, HG03577, NA19190, HG03372, NA20356, NA19314, HG03199, HG03499, HG02549, NA18916, HG03342, HG03105, NA19138, NA19681, NA19904, NA20291, HG02505, NA19041, NA19024, NA19207, HG02502, NA20355, HG02623, NA19025, HG02477, NA19908, HG03061, NA19462, NA19152, NA19327, NA19455, NA19982, NA18915, HG02144, HG03428, HG02968, HG02537, HG03294, HG02555, HG03301, NA19114, NA19449, NA18912, NA19099, NA19225, NA19395, HG03064, HG02330, NA19390, NA19435, NA19331, HG01375, NA19334, NA19439, HG01108, NA19475, HG02971, HG03442, NA19351, HG03049, NA19474, HG03063, HG03351, HG03410, HG02947, NA19146, NA19463, HG01061, HG03271, HG03196
Known GenesGRIK1, GRIK1-AS2
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3646802
Frequency
Sample Size2504
Observed Gain0
Observed Loss83
Observed Complex0
Frequencyn/a


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