Variant Details

Variant: esv3645829

Internal ID

7032577

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr20:40901729..40908105	hg38	UCSC Ensembl
Inner	chr20:40901729..40908105	hg38	UCSC Ensembl
Outer	chr20:40901474..40908406	hg38	UCSC Ensembl
	chr20:39530369..39536745	hg19	UCSC Ensembl
Inner	chr20:39530369..39536745	hg19	UCSC Ensembl
Outer	chr20:39530114..39537046	hg19	UCSC Ensembl

Cytoband

20q12

Allele length

Assembly	Allele length
hg38	6377
hg19	6377

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv16186618, essv16186674, essv16186600, essv16186610, essv16186606, essv16186667, essv16186621, essv16186609, essv16186628, essv16186599, essv16186657, essv16186643, essv16186669, essv16186603, essv16186640, essv16186596, essv16186602, essv16186613, essv16186615, essv16186625, essv16186624, essv16186650, essv16186614, essv16186646, essv16186665, essv16186601, essv16186649, essv16186652, essv16186668, essv16186661, essv16186635, essv16186660, essv16186670, essv16186612, essv16186622, essv16186637, essv16186644, essv16186654, essv16186608, essv16186632, essv16186616, essv16186647, essv16186595, essv16186663, essv16186675, essv16186636, essv16186648, essv16186658, essv16186638, essv16186631, essv16186597, essv16186671, essv16186598, essv16186605, essv16186604, essv16186617, essv16186641, essv16186620, essv16186664, essv16186653, essv16186607, essv16186639, essv16186645, essv16186633, essv16186634, essv16186673, essv16186672, essv16186659, essv16186627, essv16186651, essv16186655, essv16186630, essv16186619, essv16186611, essv16186656, essv16186662, essv16186666, essv16186642, essv16186629, essv16186626, essv16186623

Samples

NA19394, NA19701, NA19222, HG03484, HG02628, HG03378, NA19909, NA19664, HG02702, NA19704, HG03241, HG02852, NA18917, HG02012, NA19377, HG03515, HG02589, NA19314, NA18510, HG03095, NA18916, NA19023, NA19384, HG02489, HG02505, HG03209, HG03556, HG03189, NA19917, NA19372, NA19207, NA19172, NA19159, HG02571, HG03267, HG03055, HG03583, HG02882, NA19921, HG01139, HG02570, NA19210, HG03061, HG02582, NA19462, HG02511, HG03457, HG01142, NA18871, HG02470, HG00740, NA19114, HG03397, HG03446, NA20282, HG03451, NA19160, HG02484, HG02255, NA19375, NA19308, NA19390, NA18909, NA19108, NA18517, NA19037, HG03433, HG03127, HG02941, NA19467, HG03557, NA19818, NA19117, NA20348, HG02974, NA19223, HG03313, HG02679, NA19711, NA19430, NA19431

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3645829

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	81
Observed Complex	0
Frequency	n/a