Variant Details

Variant: esv3645253

Internal ID

7032003

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr20:12340242..12346139	hg38	UCSC Ensembl
Inner	chr20:12340742..12345639	hg38	UCSC Ensembl
Outer	chr20:12339242..12347139	hg38	UCSC Ensembl
	chr20:12320890..12326787	hg19	UCSC Ensembl
Inner	chr20:12321390..12326287	hg19	UCSC Ensembl
Outer	chr20:12319890..12327787	hg19	UCSC Ensembl

Cytoband

20p12.1

Allele length

Assembly	Allele length
hg38	5898
hg19	5898

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv16142944, essv16142983, essv16142999, essv16142940, essv16142916, essv16142966, essv16142931, essv16143031, essv16143033, essv16142933, essv16142921, essv16143028, essv16142968, essv16143054, essv16143057, essv16143046, essv16142927, essv16143017, essv16142981, essv16142959, essv16142961, essv16143055, essv16143038, essv16143016, essv16142960, essv16142957, essv16142979, essv16142928, essv16142919, essv16143035, essv16143036, essv16143037, essv16143018, essv16142990, essv16142917, essv16142945, essv16142952, essv16143027, essv16143025, essv16142929, essv16142913, essv16142997, essv16142969, essv16143053, essv16142962, essv16142922, essv16142967, essv16142985, essv16143048, essv16142964, essv16143022, essv16142995, essv16142911, essv16143006, essv16143010, essv16142923, essv16142908, essv16143032, essv16142955, essv16142954, essv16142991, essv16143004, essv16143003, essv16142996, essv16142994, essv16143013, essv16143049, essv16143044, essv16143042, essv16143024, essv16142974, essv16143026, essv16142934, essv16142989, essv16143043, essv16143002, essv16142937, essv16142942, essv16142910, essv16143029, essv16143005, essv16143015, essv16142935, essv16142972, essv16142984, essv16142958, essv16142992, essv16142998, essv16142973, essv16142949, essv16143014, essv16142932, essv16142965, essv16142993, essv16142980, essv16143045, essv16143007, essv16143011, essv16143039, essv16142970, essv16142976, essv16143050, essv16142943, essv16143023, essv16143030, essv16142977, essv16143019, essv16142953, essv16142939, essv16142930, essv16142986, essv16143001, essv16142924, essv16143052, essv16142915, essv16142941, essv16142907, essv16143041, essv16142950, essv16143000, essv16142948, essv16142963, essv16143012, essv16142987, essv16142947, essv16142925, essv16143056, essv16142951, essv16142982, essv16142926, essv16142909, essv16142978, essv16142975, essv16143021, essv16143020, essv16143034, essv16142920, essv16142971, essv16142914, essv16142956, essv16142936, essv16142988, essv16142912, essv16143051, essv16142946, essv16143009, essv16142918, essv16142938, essv16143008, essv16143040, essv16143047

Samples

HG01413, NA19222, NA19397, HG02481, NA19466, HG03548, NA19204, HG03517, HG03057, NA18881, HG02798, NA18877, HG03115, NA19092, NA20298, NA19819, NA19393, HG03297, HG03193, NA19098, NA19314, HG03069, HG02895, NA18988, HG03199, HG03133, HG03082, NA19171, HG03168, HG03135, NA18489, HG03452, HG03499, HG02485, HG02325, NA18923, HG02620, NA19131, HG03578, HG02054, NA19138, HG01372, HG02281, NA19923, HG03803, HG03520, HG02703, HG03268, NA19917, NA19207, HG03195, HG02642, NA18986, NA19036, HG03814, NA19901, NA18520, HG02946, NA18864, HG02623, NA19456, NA19025, NA20127, HG03114, HG02715, NA19200, HG03048, HG03169, HG02943, HG01183, HG03120, NA19908, NA19247, HG03132, HG03363, NA19347, NA19984, HG01989, HG03159, HG03081, HG02878, HG01049, HG03563, HG03301, HG01161, HG02429, NA19118, NA19000, HG03382, HG02817, HG02577, NA18499, NA18856, NA19113, HG02309, HG03391, HG01890, NA19318, HG03354, NA19160, HG02635, HG03109, HG02484, HG02722, HG02330, HG02282, HG02759, HG03539, HG02546, NA19473, HG01894, HG03117, NA19331, HG02611, NA18865, NA19835, HG02941, HG03557, HG03419, HG02814, HG03779, NA20357, NA19818, NA19328, HG03039, NA20348, NA19248, HG02095, HG03066, HG01556, NA20334, NA19093, NA19185, HG02768, HG02676, HG03077, HG01914, NA19030, HG02947, HG02763, HG02861, HG02855, NA19146, NA19312, HG02808, HG02629, HG03303, HG02343, HG03166, HG03271, HG03196

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3645253

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	151
Observed Complex	0
Frequency	n/a