Variant Details

Variant: esv3643686

Internal ID

6683757

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr19:11931658..11932390	hg38	UCSC Ensembl
Inner	chr19:11931658..11932390	hg38	UCSC Ensembl
Outer	chr19:11931451..11932579	hg38	UCSC Ensembl
	chr19:12042473..12043205	hg19	UCSC Ensembl
Inner	chr19:12042473..12043205	hg19	UCSC Ensembl
Outer	chr19:12042266..12043394	hg19	UCSC Ensembl

Cytoband

19p13.2

Allele length

Assembly	Allele length
hg38	733
hg19	733

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15991829, essv15991754, essv15991841, essv15991598, essv15991828, essv15991715, essv15991501, essv15991628, essv15991662, essv15991562, essv15991587, essv15991705, essv15991681, essv15991523, essv15991514, essv15991576, essv15991547, essv15991566, essv15991819, essv15991524, essv15991642, essv15991668, essv15991764, essv15991751, essv15991675, essv15991814, essv15991842, essv15991647, essv15991506, essv15991736, essv15991773, essv15991824, essv15991591, essv15991783, essv15991517, essv15991680, essv15991699, essv15991610, essv15991768, essv15991542, essv15991663, essv15991745, essv15991493, essv15991568, essv15991538, essv15991770, essv15991833, essv15991516, essv15991823, essv15991574, essv15991578, essv15991627, essv15991477, essv15991583, essv15991526, essv15991537, essv15991544, essv15991786, essv15991552, essv15991707, essv15991747, essv15991746, essv15991742, essv15991504, essv15991712, essv15991586, essv15991588, essv15991641, essv15991509, essv15991551, essv15991557, essv15991831, essv15991534, essv15991489, essv15991720, essv15991676, essv15991595, essv15991473, essv15991530, essv15991850, essv15991777, essv15991652, essv15991695, essv15991502, essv15991623, essv15991713, essv15991774, essv15991860, essv15991678, essv15991512, essv15991682, essv15991818, essv15991636, essv15991854, essv15991654, essv15991866, essv15991515, essv15991602, essv15991613, essv15991486, essv15991592, essv15991728, essv15991703, essv15991559, essv15991802, essv15991766, essv15991558, essv15991714, essv15991580, essv15991734, essv15991711, essv15991762, essv15991644, essv15991737, essv15991539, essv15991495, essv15991799, essv15991684, essv15991798, essv15991810, essv15991793, essv15991717, essv15991813, essv15991482, essv15991769, essv15991492, essv15991543, essv15991808, essv15991621, essv15991848, essv15991577, essv15991825, essv15991520, essv15991692, essv15991851, essv15991859, essv15991843, essv15991480, essv15991633, essv15991677, essv15991491, essv15991648, essv15991599, essv15991792, essv15991484, essv15991488, essv15991686, essv15991511, essv15991560, essv15991683, essv15991569, essv15991776, essv15991693, essv15991812, essv15991864, essv15991553, essv15991795, essv15991510, essv15991573, essv15991614, essv15991857, essv15991653, essv15991763, essv15991855, essv15991716, essv15991735, essv15991744, essv15991525, essv15991608, essv15991611, essv15991661, essv15991696, essv15991726, essv15991619, essv15991733, essv15991508, essv15991541, essv15991756, essv15991590, essv15991834, essv15991765, essv15991564, essv15991868, essv15991666, essv15991719, essv15991532, essv15991761, essv15991702, essv15991748, essv15991809, essv15991835, essv15991622, essv15991632, essv15991830, essv15991503, essv15991725, essv15991749, essv15991556, essv15991639, essv15991475, essv15991771, essv15991540, essv15991603, essv15991796, essv15991673, essv15991803, essv15991847, essv15991657, essv15991708, essv15991738, essv15991807, essv15991487, essv15991596, essv15991691, essv15991753, essv15991572, essv15991531, essv15991731, essv15991616, essv15991656, essv15991815, essv15991549, essv15991688, essv15991575, essv15991589, essv15991701, essv15991739, essv15991498, essv15991554, essv15991821, essv15991788, essv15991555, essv15991593, essv15991826, essv15991649, essv15991476, essv15991601, essv15991548, essv15991545, essv15991630, essv15991612, essv15991494, essv15991839, essv15991853, essv15991780, essv15991600, essv15991689, essv15991811, essv15991727, essv15991718, essv15991730, essv15991836, essv15991791, essv15991755, essv15991594, essv15991585, essv15991832, essv15991800, essv15991721, essv15991759, essv15991685, essv15991849, essv15991861, essv15991472, essv15991490, essv15991667, essv15991797, essv15991635, essv15991805, essv15991723, essv15991752, essv15991500, essv15991528, essv15991607, essv15991816, essv15991505, essv15991781, essv15991845, essv15991784, essv15991804, essv15991519, essv15991840, essv15991852, essv15991625, essv15991679, essv15991758, essv15991570, essv15991785, essv15991709, essv15991546, essv15991837, essv15991615, essv15991670, essv15991862, essv15991655, essv15991645, essv15991637, essv15991700, essv15991817, essv15991620, essv15991604, essv15991606, essv15991529, essv15991710, essv15991609, essv15991698, essv15991822, essv15991858, essv15991775, essv15991579, essv15991787, essv15991674, essv15991827, essv15991474, essv15991671, essv15991856, essv15991760, essv15991536, essv15991779, essv15991743, essv15991869, essv15991740, essv15991507, essv15991527, essv15991790, essv15991640, essv15991664, essv15991767, essv15991778, essv15991838, essv15991722, essv15991724, essv15991618, essv15991497, essv15991697, essv15991658, essv15991863, essv15991651, essv15991533, essv15991750, essv15991801, essv15991782, essv15991483, essv15991629, essv15991794, essv15991672, essv15991741, essv15991522, essv15991624, essv15991571, essv15991617, essv15991478, essv15991567, essv15991820, essv15991865, essv15991499, essv15991631, essv15991669, essv15991694, essv15991844, essv15991565, essv15991605, essv15991634, essv15991846, essv15991561, essv15991772, essv15991535, essv15991481, essv15991485, essv15991646, essv15991518, essv15991563, essv15991806, essv15991660, essv15991650, essv15991496, essv15991513, essv15991789, essv15991704, essv15991665, essv15991584, essv15991550, essv15991729, essv15991626, essv15991659, essv15991479, essv15991706, essv15991581, essv15991582, essv15991757, essv15991521, essv15991638, essv15991867, essv15991597, essv15991690, essv15991732, essv15991643, essv15991687

Samples

HG02470, HG02879, HG03136, HG01776, HG02808, NA19207, HG02496, NA18870, NA19248, HG02854, HG03121, NA19030, HG02882, HG03354, HG03567, NA19214, HG02675, HG03279, NA18520, HG02330, NA19026, NA19904, HG03064, HG03351, HG03479, NA19437, NA19114, HG01882, HG03563, NA19093, HG02549, HG01885, HG03086, HG03247, NA19223, HG01079, HG02450, NA19319, NA20296, HG01197, HG03057, NA18516, HG03133, NA19334, NA18517, HG02722, HG02946, HG01915, HG03311, HG02884, NA20362, NA18865, NA20321, HG02508, HG03111, HG01605, NA18489, HG03432, NA19379, HG03099, HG00698, HG02676, HG01708, HG01958, NA20897, NA19320, NA19378, HG04001, NA19257, HG02613, HG00737, HG03378, HG03109, HG04152, NA19472, HG02805, NA20521, NA19037, HG03049, HG02982, NA20320, HG02585, NA19028, HG03162, NA19463, HG01148, HG03461, NA19984, HG03575, HG03054, HG03484, NA19390, HG02646, HG02700, NA19917, HG04164, HG02554, HG02568, HG01709, HG02772, HG03442, HG02643, NA19429, NA19908, HG03052, HG03130, HG01360, HG02143, NA18916, HG03781, NA19036, NA19457, HG01247, HG03114, HG01986, NA19042, HG02737, NA19324, HG02757, HG02283, HG02888, NA19247, NA19360, HG02840, HG03902, HG01111, HG03085, HG03126, HG02325, NA19129, NA19172, NA19189, HG02185, HG03195, NA19372, HG02054, HG02768, HG03040, NA19703, HG03397, HG04161, NA19393, NA19024, HG02562, NA19384, HG03455, NA12348, NA18923, NA19102, HG01914, HG02461, NA06986, NA18522, HG03547, HG03649, NA18502, NA19119, HG03472, HG02439, NA20540, NA20822, NA19098, HG01170, HG02429, HG03097, HG03514, HG01176, NA18858, HG03518, NA19347, HG02511, HG02771, NA18878, NA19332, NA19909, NA20815, HG03072, HG01630, HG02502, HG02852, HG03157, HG01070, HG02571, NA19131, NA19159, HG01702, HG03291, NA18910, HG01894, HG02052, HG02479, HG02536, HG03297, NA19307, HG03115, NA19141, HG01880, HG02582, HG02881, HG01979, HG03132, NA19235, HG02484, HG03363, HG03446, HG00590, NA19376, HG03888, HG02819, NA18907, NA19391, HG03499, NA18915, HG01695, NA19025, NA20332, NA19394, NA19403, HG03989, NA19116, HG03267, HG03367, HG03556, HG03172, NA20274, NA20298, HG02628, NA19434, HG03198, NA19818, HG02481, NA18577, NA19099, NA19446, HG03105, NA18879, NA19475, HG03476, NA18864, NA12003, HG01804, HG03081, HG02837, NA19041, NA19225, HG03074, HG03343, HG01886, HG03259, HG02678, NA12546, NA19160, HG02464, HG01275, HG02256, HG03025, HG03139, NA20359, HG02476, HG03077, NA19198, NA19118, HG02721, NA19315, HG02642, NA19346, HG03557, HG03271, HG03372, NA18853, NA19113, HG01489, NA19473, HG02574, HG02505, NA19454, NA19468, HG02860, HG03730, NA19456, HG02820, HG03460, NA20899, NA19121, NA19466, HG03091, HG01198, HG02282, HG02610, HG02715, HG03163, HG02666, HG02890, HG01513, NA19913, NA18647, NA19445, NA19625, HG01775, HG01241, HG02970, NA19321, NA20890, NA20278, HG03280, HG01052, HG04156, NA18933, NA19404, HG03342, NA18874, HG01205, HG03112, HG02799, HG02983, HG03410, HG03055, HG03304, HG02759, NA19455, HG01098, NA20802, HG02979, NA19430, NA19317, HG01085, HG02974, HG02014, HG03046, NA19451, HG03265, HG02887, HG01883, HG03973, HG01049, NA19184, HG03048, NA19461, HG02314, NA21098, NA19210, HG03294, NA19017, HG03401, HG03548, HG03538, HG03229, NA19108, HG01990, HG02323, NA19355, HG03488, HG02433, HG02583, HG03572, NA19308, NA19467, NA19147, HG03457, HG03159, NA19438, HG00256, NA19117, NA20532, HG02455, NA19428, NA19383, HG03470, HG01363, NA18934, HG02634, NA20356, HG02696, HG02009, HG00638, HG03202, NA20757, NA19020, HG02577, HG03867, HG02968, HG03436, NA18856, HG03241, NA18876, HG01396, HG02763, HG03445, HG03583, HG02220, HG03100, HG03539, NA19256, HG03027, HG02595, HG02756, HG04185, HG02941

Known Genes

ZNF700

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3643686

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	398
Observed Complex	0
Frequency	n/a