A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3643668



Internal ID6683739
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:11302898..11304758hg38UCSC Ensembl
Innerchr19:11302898..11304758hg38UCSC Ensembl
Outerchr19:11302758..11305039hg38UCSC Ensembl
chr19:11413574..11415434hg19UCSC Ensembl
Innerchr19:11413574..11415434hg19UCSC Ensembl
Outerchr19:11413434..11415715hg19UCSC Ensembl
Cytoband19p13.2
Allele length
AssemblyAllele length
hg381861
hg191861
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv15990779, essv15990717, essv15990758, essv15990760, essv15990748, essv15990757, essv15990750, essv15990741, essv15990732, essv15990755, essv15990733, essv15990768, essv15990736, essv15990762, essv15990764, essv15990718, essv15990754, essv15990782, essv15990719, essv15990743, essv15990712, essv15990723, essv15990715, essv15990746, essv15990720, essv15990734, essv15990766, essv15990774, essv15990753, essv15990735, essv15990780, essv15990744, essv15990731, essv15990778, essv15990739, essv15990740, essv15990725, essv15990751, essv15990749, essv15990773, essv15990713, essv15990772, essv15990770, essv15990745, essv15990747, essv15990714, essv15990776, essv15990742, essv15990771, essv15990761, essv15990711, essv15990765, essv15990781, essv15990763, essv15990737, essv15990756, essv15990767, essv15990724, essv15990738, essv15990777, essv15990775, essv15990722, essv15990727, essv15990726, essv15990728, essv15990752, essv15990769, essv15990759, essv15990721, essv15990716, essv15990729, essv15990730
SamplesNA19394, NA18502, NA19399, HG03449, NA18917, NA20298, NA19393, HG03100, NA18870, HG03199, NA19446, HG03168, HG02952, HG02595, NA18916, HG02054, NA18498, HG03520, NA18868, HG02885, NA19207, NA19172, HG01176, NA19189, HG02545, NA19025, HG03114, HG02819, HG02442, NA19707, HG03061, NA19184, HG02449, HG01882, NA19455, HG02450, NA18871, HG02497, HG03124, HG02555, HG03202, HG02577, HG03388, NA19113, NA18853, HG03046, NA19452, HG03109, HG01204, NA19035, NA19308, HG02557, HG03367, NA19454, NA18865, NA19835, HG01342, HG03103, NA19475, NA19818, NA19376, NA19328, HG03112, NA20334, HG02013, NA19030, NA19146, HG01886, HG03198, HG02808, HG03439, HG03196
Known GenesTSPAN16
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3643668
Frequency
Sample Size2504
Observed Gain0
Observed Loss72
Observed Complex0
Frequencyn/a


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