Variant Details

Variant: esv3642262

Internal ID

7029032

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr18:38564579..38565534	hg38	UCSC Ensembl
Inner	chr18:38564579..38565534	hg38	UCSC Ensembl
Outer	chr18:38564327..38565840	hg38	UCSC Ensembl
	chr18:36144543..36145498	hg19	UCSC Ensembl
Inner	chr18:36144543..36145498	hg19	UCSC Ensembl
Outer	chr18:36144291..36145804	hg19	UCSC Ensembl

Cytoband

18q12.2

Allele length

Assembly	Allele length
hg38	956
hg19	956

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15844565, essv15844526, essv15844555, essv15844528, essv15844532, essv15844579, essv15844561, essv15844580, essv15844551, essv15844588, essv15844558, essv15844520, essv15844524, essv15844521, essv15844569, essv15844587, essv15844544, essv15844549, essv15844559, essv15844530, essv15844523, essv15844567, essv15844552, essv15844550, essv15844537, essv15844533, essv15844535, essv15844570, essv15844585, essv15844547, essv15844589, essv15844583, essv15844529, essv15844538, essv15844541, essv15844539, essv15844553, essv15844527, essv15844536, essv15844568, essv15844543, essv15844577, essv15844534, essv15844571, essv15844556, essv15844560, essv15844576, essv15844572, essv15844573, essv15844563, essv15844581, essv15844578, essv15844557, essv15844591, essv15844546, essv15844564, essv15844584, essv15844562, essv15844566, essv15844545, essv15844582, essv15844574, essv15844525, essv15844548, essv15844590, essv15844586, essv15844540, essv15844554, essv15844542, essv15844531, essv15844575, essv15844522

Samples

NA19028, HG03559, HG03121, HG02481, HG03163, NA19914, NA18877, HG02012, HG03295, HG03193, HG02895, HG03095, HG02621, HG03452, HG03499, HG02952, NA19307, NA19119, HG03370, NA19131, NA19023, NA19457, HG02054, NA19038, HG02505, HG02281, HG01893, HG03520, HG03268, NA19317, NA18520, HG02427, NA19239, HG03055, HG03114, HG03270, HG02009, HG02943, NA19670, HG02582, NA19347, HG02449, HG02322, NA18910, HG02014, HG02537, NA19461, HG03078, NA18853, HG03571, NA19257, HG02586, NA19436, HG03064, NA19206, HG02557, NA19390, NA19256, HG03437, NA19428, HG01108, NA19818, NA18501, NA19438, HG01912, HG02646, HG03410, NA19430, HG02855, NA19312, HG01886, HG02343

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3642262

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	72
Observed Complex	0
Frequency	n/a