Variant Details

Variant: esv3641817

Internal ID

6681899

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr18:11855846..11856682	hg38	UCSC Ensembl
Inner	chr18:11855846..11856682	hg38	UCSC Ensembl
Outer	chr18:11855523..11856972	hg38	UCSC Ensembl
	chr18:11855845..11856681	hg19	UCSC Ensembl
Inner	chr18:11855845..11856681	hg19	UCSC Ensembl
Outer	chr18:11855522..11856971	hg19	UCSC Ensembl

Cytoband

18p11.21

Allele length

Assembly	Allele length
hg38	837
hg19	837

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15809920, essv15809919, essv15809903, essv15809958, essv15809926, essv15809960, essv15809942, essv15809939, essv15809962, essv15809944, essv15809891, essv15809945, essv15809892, essv15809865, essv15809954, essv15809900, essv15809966, essv15809860, essv15809947, essv15809906, essv15809977, essv15809937, essv15809883, essv15809878, essv15809914, essv15809929, essv15809953, essv15809943, essv15809911, essv15809894, essv15809867, essv15809951, essv15809898, essv15809868, essv15809976, essv15809864, essv15809952, essv15809936, essv15809888, essv15809955, essv15809925, essv15809889, essv15809915, essv15809879, essv15809930, essv15809859, essv15809909, essv15809917, essv15809886, essv15809881, essv15809969, essv15809882, essv15809884, essv15809959, essv15809897, essv15809875, essv15809975, essv15809908, essv15809941, essv15809890, essv15809921, essv15809973, essv15809910, essv15809907, essv15809863, essv15809876, essv15809895, essv15809971, essv15809904, essv15809949, essv15809963, essv15809938, essv15809974, essv15809918, essv15809912, essv15809871, essv15809870, essv15809970, essv15809940, essv15809874, essv15809967, essv15809862, essv15809957, essv15809913, essv15809873, essv15809880, essv15809961, essv15809934, essv15809877, essv15809964, essv15809946, essv15809972, essv15809896, essv15809866, essv15809932, essv15809931, essv15809901, essv15809924, essv15809902, essv15809869, essv15809950, essv15809927, essv15809948, essv15809928, essv15809905, essv15809887, essv15809885, essv15809922, essv15809893, essv15809899, essv15809965, essv15809861, essv15809956, essv15809916, essv15809968, essv15809935, essv15809872, essv15809923, essv15809933

Samples

HG02574, HG03484, NA19703, NA19397, NA19909, HG03548, NA19204, NA18881, HG02798, HG03115, NA20321, NA19092, NA18486, HG03298, HG03455, HG03190, HG02624, HG03295, HG03297, HG02888, NA18510, NA19107, NA19446, HG03572, HG03074, NA19171, HG03135, HG02485, HG03091, HG02541, HG03485, HG02756, HG03370, HG03578, HG02054, NA19138, NA20291, HG02922, HG02281, HG02562, HG02561, NA20278, NA19471, NA19317, HG02588, HG01950, HG02427, NA19239, NA18864, NA19456, HG01275, HG02882, NA18867, NA19200, HG03270, HG02819, HG02479, HG02716, HG03120, NA19908, HG03054, HG01187, HG02334, NA19152, NA18933, NA19984, NA19184, HG01882, NA19043, NA18516, HG02144, NA18871, HG03081, HG02968, HG03027, HG02497, HG01889, HG03563, HG03301, HG03085, NA19114, NA20299, HG03202, HG02577, HG03388, HG03446, NA18523, HG03354, NA19308, NA19440, HG02282, NA18909, NA19834, HG02501, NA19473, HG03259, NA19439, NA19428, HG02464, HG03432, HG01577, NA19248, NA19351, NA19474, NA20289, NA18873, NA18876, NA19116, HG03077, HG03538, HG03445, HG02947, NA19312, HG02465, HG02805, HG02629, HG02643, NA19346, HG02760

Known Genes

GNAL

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3641817

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	119
Observed Complex	0
Frequency	n/a