Variant Details

Variant: esv3641602

Internal ID

6681687

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr18:3568888..3571728	hg38	UCSC Ensembl
Inner	chr18:3569038..3571578	hg38	UCSC Ensembl
Outer	chr18:3568738..3571878	hg38	UCSC Ensembl
	chr18:3568886..3571726	hg19	UCSC Ensembl
Inner	chr18:3569036..3571576	hg19	UCSC Ensembl
Outer	chr18:3568736..3571876	hg19	UCSC Ensembl

Cytoband

18p11.31

Allele length

Assembly	Allele length
hg38	2841
hg19	2841

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15779597, essv15779584, essv15779647, essv15779624, essv15779553, essv15779606, essv15779614, essv15779564, essv15779538, essv15779547, essv15779573, essv15779643, essv15779618, essv15779590, essv15779627, essv15779602, essv15779567, essv15779556, essv15779524, essv15779596, essv15779642, essv15779562, essv15779549, essv15779651, essv15779607, essv15779653, essv15779542, essv15779661, essv15779613, essv15779611, essv15779648, essv15779610, essv15779530, essv15779636, essv15779535, essv15779520, essv15779585, essv15779563, essv15779600, essv15779589, essv15779568, essv15779592, essv15779631, essv15779605, essv15779550, essv15779616, essv15779519, essv15779650, essv15779641, essv15779523, essv15779595, essv15779526, essv15779518, essv15779574, essv15779659, essv15779545, essv15779615, essv15779582, essv15779560, essv15779540, essv15779646, essv15779645, essv15779621, essv15779580, essv15779594, essv15779620, essv15779604, essv15779522, essv15779557, essv15779561, essv15779543, essv15779655, essv15779548, essv15779656, essv15779623, essv15779619, essv15779654, essv15779644, essv15779565, essv15779591, essv15779554, essv15779626, essv15779583, essv15779516, essv15779546, essv15779638, essv15779601, essv15779588, essv15779539, essv15779609, essv15779536, essv15779555, essv15779598, essv15779639, essv15779662, essv15779537, essv15779558, essv15779533, essv15779635, essv15779581, essv15779570, essv15779640, essv15779541, essv15779587, essv15779532, essv15779652, essv15779517, essv15779551, essv15779625, essv15779593, essv15779657, essv15779637, essv15779632, essv15779559, essv15779658, essv15779577, essv15779629, essv15779628, essv15779660, essv15779552, essv15779633, essv15779630, essv15779612, essv15779572, essv15779515, essv15779586, essv15779622, essv15779531, essv15779571, essv15779521, essv15779649, essv15779576, essv15779634, essv15779529, essv15779603, essv15779528, essv15779525, essv15779617, essv15779566, essv15779527, essv15779569, essv15779599, essv15779578, essv15779534, essv15779579, essv15779575, essv15779608, essv15779544

Samples

NA18577, HG03690, NA18998, NA18745, HG04210, HG03812, NA20882, HG01850, HG03800, HG04096, HG00536, HG02035, HG02122, HG02727, HG02061, NA18603, HG02360, HG00729, HG01465, HG02058, NA18596, HG04164, HG00449, HG02356, HG03944, NA18969, HG01873, NA19089, HG03770, HG04038, HG03705, HG03757, HG03722, NA18995, HG01177, HG02383, HG02155, NA18567, HG04144, HG02085, HG04182, HG02299, HG00851, NA18642, HG00537, HG01859, NA18611, HG03803, NA18970, HG03910, HG00867, HG02395, HG02067, NA20896, HG03595, HG03696, HG03947, HG03693, HG02178, NA20884, HG02104, HG01844, HG02409, NA18539, NA18638, NA18648, HG01312, NA18645, HG03709, HG02402, HG03780, HG02166, HG00629, HG00443, HG02070, HG01871, HG02075, HG01595, HG01857, HG02380, HG00701, HG02731, NA18579, HG02102, HG01029, HG00692, NA18548, HG02364, HG03742, HG03730, HG03660, HG00531, NA21112, HG02048, NA18532, HG02086, HG00613, HG01842, HG02724, HG02601, HG03969, HG02031, HG03991, HG03898, HG00410, NA18634, HG03743, NA18953, HG00407, HG01858, HG03778, HG04006, NA19747, HG02088, HG03695, HG01800, HG01874, NA19090, HG03689, HG02651, NA21123, HG01974, HG01933, NA18610, HG02188, HG03779, HG02398, HG02379, HG02373, NA18971, HG02401, HG03977, HG02079, HG01846, HG02392, NA20852, NA18636, NA21093, HG03615, HG02410, HG04098, HG01600, HG03872, HG02681, NA20886, HG02778, HG00628, HG03698

Known Genes

DLGAP1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3641602

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	148
Observed Complex	0
Frequency	n/a