Variant Details

Variant: esv3641359

Internal ID

7028133

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr17:80018195..80027045	hg38	UCSC Ensembl
Inner	chr17:80018195..80027045	hg38	UCSC Ensembl
Outer	chr17:80017828..80027445	hg38	UCSC Ensembl
	chr17:77991994..78000844	hg19	UCSC Ensembl
Inner	chr17:77991994..78000844	hg19	UCSC Ensembl
Outer	chr17:77991627..78001244	hg19	UCSC Ensembl

Cytoband

17q25.3

Allele length

Assembly	Allele length
hg38	8851
hg19	8851

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15753771, essv15753705, essv15753592, essv15753739, essv15753757, essv15753752, essv15753701, essv15753688, essv15753629, essv15753578, essv15753807, essv15753528, essv15753724, essv15753755, essv15753762, essv15753732, essv15753552, essv15753745, essv15753816, essv15753815, essv15753764, essv15753584, essv15753566, essv15753546, essv15753804, essv15753635, essv15753712, essv15753606, essv15753531, essv15753806, essv15753589, essv15753726, essv15753783, essv15753788, essv15753655, essv15753754, essv15753671, essv15753593, essv15753648, essv15753560, essv15753619, essv15753728, essv15753791, essv15753738, essv15753735, essv15753631, essv15753774, essv15753683, essv15753775, essv15753818, essv15753591, essv15753539, essv15753800, essv15753692, essv15753773, essv15753620, essv15753628, essv15753803, essv15753753, essv15753612, essv15753555, essv15753610, essv15753518, essv15753662, essv15753750, essv15753769, essv15753690, essv15753548, essv15753686, essv15753794, essv15753751, essv15753538, essv15753817, essv15753574, essv15753758, essv15753529, essv15753696, essv15753641, essv15753677, essv15753544, essv15753596, essv15753525, essv15753622, essv15753642, essv15753808, essv15753657, essv15753653, essv15753522, essv15753702, essv15753678, essv15753550, essv15753811, essv15753659, essv15753614, essv15753568, essv15753651, essv15753681, essv15753747, essv15753680, essv15753605, essv15753541, essv15753633, essv15753765, essv15753770, essv15753616, essv15753549, essv15753564, essv15753810, essv15753625, essv15753684, essv15753746, essv15753608, essv15753543, essv15753576, essv15753782, essv15753740, essv15753727, essv15753729, essv15753743, essv15753663, essv15753707, essv15753563, essv15753598, essv15753766, essv15753784, essv15753581, essv15753537, essv15753588, essv15753798, essv15753572, essv15753536, essv15753634, essv15753517, essv15753647, essv15753759, essv15753802, essv15753710, essv15753716, essv15753515, essv15753781, essv15753637, essv15753597, essv15753691, essv15753761, essv15753785, essv15753694, essv15753768, essv15753711, essv15753790, essv15753664, essv15753668, essv15753676, essv15753760, essv15753685, essv15753741, essv15753600, essv15753542, essv15753749, essv15753793, essv15753721, essv15753575, essv15753669, essv15753706, essv15753814, essv15753630, essv15753565, essv15753709, essv15753789, essv15753632, essv15753586, essv15753526, essv15753585, essv15753682, essv15753673, essv15753652, essv15753779, essv15753786, essv15753602, essv15753599, essv15753557, essv15753703, essv15753719, essv15753579, essv15753733, essv15753577, essv15753559, essv15753776, essv15753573, essv15753737, essv15753580, essv15753693, essv15753720, essv15753666, essv15753618, essv15753780, essv15753730, essv15753583, essv15753767, essv15753569, essv15753792, essv15753772, essv15753613, essv15753717, essv15753604, essv15753624, essv15753558, essv15753736, essv15753640, essv15753704, essv15753595, essv15753742, essv15753734, essv15753656, essv15753725, essv15753609, essv15753514, essv15753699, essv15753661, essv15753556, essv15753547, essv15753621, essv15753670, essv15753665, essv15753723, essv15753527, essv15753617, essv15753708, essv15753645, essv15753521, essv15753658, essv15753672, essv15753545, essv15753513, essv15753812, essv15753715, essv15753799, essv15753722, essv15753636, essv15753590, essv15753520, essv15753561, essv15753660, essv15753626, essv15753809, essv15753797, essv15753801, essv15753777, essv15753698, essv15753700, essv15753675, essv15753535, essv15753787, essv15753646, essv15753607, essv15753778, essv15753748, essv15753674, essv15753643, essv15753667, essv15753512, essv15753763, essv15753731, essv15753623, essv15753587, essv15753516, essv15753562, essv15753697, essv15753639, essv15753534, essv15753713, essv15753523, essv15753649, essv15753582, essv15753627, essv15753594, essv15753524, essv15753796, essv15753567, essv15753756, essv15753654, essv15753533, essv15753714, essv15753601, essv15753805, essv15753553, essv15753554, essv15753519, essv15753687, essv15753679, essv15753638, essv15753603, essv15753570, essv15753530, essv15753615, essv15753795, essv15753718, essv15753689, essv15753813, essv15753532, essv15753695, essv15753644, essv15753611, essv15753540, essv15753571, essv15753744, essv15753650, essv15753551

Samples

HG01985, HG02574, NA19028, HG02944, HG04096, HG02481, NA19909, NA18947, HG03052, HG01885, HG04222, HG03175, HG03247, HG03717, HG03115, NA19350, HG03941, HG02691, HG03521, NA20294, NA20298, HG03455, HG01802, NA18878, HG02624, NA18504, HG03515, HG02384, HG02536, NA19920, NA18510, NA19067, HG03478, HG03572, HG03133, HG03645, HG03436, NA19379, HG02621, HG03385, HG03168, NA19315, HG03722, HG02952, HG02756, HG02521, HG02860, HG03342, HG03978, NA19384, HG02603, HG03520, NA20278, NA18868, HG03212, HG03045, NA19207, NA20412, NA21129, HG02427, HG02545, NA20355, NA20127, HG03585, NA18867, NA18645, HG02716, HG03343, HG02943, HG02442, NA18747, HG03132, HG01867, HG03685, HG03061, NA19403, HG02380, HG03990, NA18933, HG02678, HG02449, HG01882, HG00556, HG01142, HG03575, HG03081, HG02014, HG01796, HG04177, NA18907, NA19461, HG03730, HG03802, HG03446, HG02881, HG03046, NA19452, HG03672, HG02256, HG03752, HG00864, NA19395, NA18593, HG02568, HG02722, HG02772, NA19017, HG04227, NA19149, NA19147, NA18517, HG03437, HG04026, NA20276, NA19019, HG02546, HG02721, NA20870, NA19331, HG02611, HG03259, HG02941, HG02580, HG02317, NA20281, HG03103, NA20897, NA19328, HG02971, HG04140, HG03642, NA19223, HG03279, NA19474, HG02107, NA19093, NA19185, HG02768, NA18876, NA19116, NA19900, HG02763, HG01807, HG02855, NA19312, HG02851, HG03867, HG02643, HG03303, HG03439, NA19346, NA19214, NA19431, HG03265, HG03271, HG03514, HG00403, HG02339, NA21110, HG03559, HG03366, HG02610, NA19397, NA18924, HG03548, HG03821, HG02973, NA20899, HG02648, HG04202, HG02337, HG02318, NA19020, NA18917, NA18877, HG03558, HG03130, HG02870, HG03280, NA19819, HG03895, HG03667, HG03297, HG00879, NA19190, NA18870, HG02895, HG03074, NA19374, NA19792, HG03464, HG02810, HG03757, NA20850, HG02155, NA19119, HG03370, HG02549, NA19131, HG00851, NA18498, HG03479, HG03079, HG03209, HG03826, HG02395, HG03986, HG02067, NA19917, NA20340, HG01369, NA19471, HG01440, NA19159, HG03352, NA18520, NA19209, HG03055, HG02882, NA19451, HG03270, HG02737, HG03120, NA19210, NA19462, NA19347, HG00701, HG02511, HG02554, NA18516, HG00436, HG02450, HG02307, NA21098, NA18910, HG03124, HG02757, HG01049, HG01390, HG03742, HG03123, HG03563, HG03085, NA19114, HG03871, NA20299, NA19449, HG03136, HG02817, HG03202, HG01241, NA19320, NA18853, HG03634, NA19338, HG03391, NA19257, HG02184, HG02585, NA19095, HG03109, HG03567, HG02813, HG02613, HG02455, NA18909, NA19834, NA19108, HG02799, HG01915, NA19037, HG02923, HG02837, HG00623, NA19334, NA19439, HG02839, HG01260, NA21126, HG04003, HG02181, NA20357, NA19376, NA19323, NA19143, HG03039, HG00409, HG01556, HG02053, NA19713, HG02462, HG02676, HG01817, HG00698, HG03538, HG02052, HG01464, HG03882, NA18488, HG03856, HG01082, HG04056, HG02465, HG01672, NA18522, HG02629, HG02343

Known Genes

TBC1D16

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3641359

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	307
Observed Complex	0
Frequency	n/a