Variant Details

Variant: esv3641268

Internal ID

6681353

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr17:75879126..75883185	hg38	UCSC Ensembl
Inner	chr17:75879173..75883138	hg38	UCSC Ensembl
Outer	chr17:75879079..75883232	hg38	UCSC Ensembl
	chr17:73875207..73879266	hg19	UCSC Ensembl
Inner	chr17:73875254..73879219	hg19	UCSC Ensembl
Outer	chr17:73875160..73879313	hg19	UCSC Ensembl

Cytoband

17q25.1

Allele length

Assembly	Allele length
hg38	4060
hg19	4060

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15740681, essv15740772, essv15740827, essv15740741, essv15740800, essv15740686, essv15740685, essv15740723, essv15740791, essv15740818, essv15740792, essv15740775, essv15740705, essv15740815, essv15740700, essv15740817, essv15740757, essv15740693, essv15740828, essv15740696, essv15740711, essv15740684, essv15740690, essv15740676, essv15740829, essv15740740, essv15740802, essv15740701, essv15740795, essv15740706, essv15740763, essv15740821, essv15740797, essv15740715, essv15740710, essv15740755, essv15740694, essv15740798, essv15740778, essv15740752, essv15740735, essv15740736, essv15740753, essv15740796, essv15740687, essv15740679, essv15740726, essv15740713, essv15740737, essv15740816, essv15740799, essv15740722, essv15740682, essv15740698, essv15740703, essv15740808, essv15740761, essv15740807, essv15740708, essv15740785, essv15740822, essv15740746, essv15740704, essv15740730, essv15740742, essv15740801, essv15740702, essv15740784, essv15740745, essv15740789, essv15740776, essv15740751, essv15740756, essv15740765, essv15740721, essv15740771, essv15740790, essv15740788, essv15740825, essv15740805, essv15740716, essv15740718, essv15740770, essv15740810, essv15740804, essv15740744, essv15740748, essv15740731, essv15740830, essv15740786, essv15740738, essv15740803, essv15740732, essv15740819, essv15740750, essv15740766, essv15740707, essv15740728, essv15740758, essv15740688, essv15740809, essv15740764, essv15740714, essv15740811, essv15740712, essv15740823, essv15740678, essv15740695, essv15740683, essv15740699, essv15740806, essv15740749, essv15740759, essv15740767, essv15740783, essv15740691, essv15740814, essv15740697, essv15740787, essv15740729, essv15740689, essv15740773, essv15740826, essv15740780, essv15740782, essv15740777, essv15740769, essv15740747, essv15740725, essv15740779, essv15740760, essv15740734, essv15740768, essv15740794, essv15740754, essv15740717, essv15740739, essv15740733, essv15740677, essv15740743, essv15740680, essv15740831, essv15740762, essv15740692, essv15740793, essv15740824, essv15740719, essv15740781, essv15740724, essv15740820, essv15740774, essv15740727, essv15740812, essv15740813, essv15740720, essv15740709

Samples

NA19394, HG02614, NA20339, HG03366, NA19700, HG03484, HG02583, HG02481, NA19909, HG03548, NA19914, HG03057, HG02318, NA18881, HG03449, NA18877, HG02891, HG02012, HG03521, HG03190, NA19393, HG03100, HG03295, NA20332, NA19684, HG03515, HG03193, HG02589, NA19443, NA19920, NA19314, HG02769, HG03572, HG03133, HG03464, HG03086, NA19319, NA18489, NA20320, HG02840, NA19198, HG02756, HG02620, HG02860, HG03246, HG02054, NA18498, HG02111, HG03079, HG02505, HG02281, NA19922, HG02562, HG03520, HG03189, HG02573, NA20340, NA19238, NA19235, NA19207, HG01176, HG03380, NA19189, NA18864, NA19445, NA19200, HG03343, HG02570, NA19247, NA19437, HG03132, HG03363, HG03061, NA19184, HG02449, NA19327, HG01882, HG02108, HG02554, NA18516, NA19982, HG02887, HG01989, HG01142, HG02307, HG03081, HG02508, HG01880, HG02497, HG02976, HG02878, HG01889, HG02555, HG03311, HG03123, HG03563, NA18856, NA18912, HG02309, NA18853, HG03571, HG02979, NA19452, HG02332, HG02568, HG02675, NA19436, HG02813, NA19401, NA19375, HG02455, HG03028, NA19440, HG02807, NA19390, NA19108, NA19149, NA18517, HG02759, HG03539, HG02983, HG01362, HG01958, HG02837, HG01396, NA19144, HG02314, NA20790, NA20362, HG03127, NA19310, NA19360, HG02558, NA19117, HG03039, HG02971, HG01432, NA19248, HG02974, HG03442, HG02970, HG01912, HG02107, NA19096, HG03470, HG01914, NA19121, NA19030, NA19146, NA18511, HG01886, HG03198, HG03118, HG03303, HG03265, NA19676

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3641268

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	156
Observed Complex	0
Frequency	n/a