Variant Details

Variant: esv3640584

Internal ID

7027359

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr17:41350501..41369651	hg38	UCSC Ensembl
Inner	chr17:41350501..41369651	hg38	UCSC Ensembl
Outer	chr17:41350185..41369843	hg38	UCSC Ensembl
	chr17:39506753..39525903	hg19	UCSC Ensembl
Inner	chr17:39506753..39525903	hg19	UCSC Ensembl
Outer	chr17:39506437..39526095	hg19	UCSC Ensembl

Cytoband

17q21.2

Allele length

Assembly	Allele length
hg38	19151
hg19	19151

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15678614, essv15678574, essv15678550, essv15678635, essv15678595, essv15678569, essv15678665, essv15678642, essv15678568, essv15678636, essv15678599, essv15678587, essv15678606, essv15678579, essv15678580, essv15678553, essv15678648, essv15678678, essv15678645, essv15678560, essv15678562, essv15678679, essv15678675, essv15678577, essv15678610, essv15678551, essv15678590, essv15678589, essv15678676, essv15678652, essv15678632, essv15678672, essv15678612, essv15678588, essv15678621, essv15678584, essv15678582, essv15678575, essv15678581, essv15678548, essv15678583, essv15678662, essv15678613, essv15678618, essv15678634, essv15678602, essv15678659, essv15678578, essv15678573, essv15678557, essv15678600, essv15678619, essv15678601, essv15678669, essv15678637, essv15678654, essv15678667, essv15678657, essv15678655, essv15678605, essv15678624, essv15678607, essv15678646, essv15678623, essv15678674, essv15678626, essv15678660, essv15678559, essv15678558, essv15678617, essv15678622, essv15678591, essv15678620, essv15678565, essv15678630, essv15678554, essv15678633, essv15678628, essv15678631, essv15678547, essv15678653, essv15678625, essv15678570, essv15678598, essv15678629, essv15678604, essv15678658, essv15678594, essv15678572, essv15678566, essv15678649, essv15678567, essv15678546, essv15678597, essv15678671, essv15678555, essv15678644, essv15678627, essv15678677, essv15678552, essv15678647, essv15678661, essv15678638, essv15678640, essv15678666, essv15678664, essv15678639, essv15678670, essv15678611, essv15678673, essv15678609, essv15678571, essv15678586, essv15678643, essv15678608, essv15678656, essv15678616, essv15678564, essv15678603, essv15678596, essv15678563, essv15678668, essv15678561, essv15678592, essv15678556, essv15678663, essv15678576, essv15678593, essv15678549, essv15678650, essv15678545, essv15678615, essv15678641, essv15678651, essv15678585

Samples

NA18502, NA19028, HG03366, NA19222, NA19700, HG03548, NA19204, NA18508, HG02702, HG02836, NA18917, HG03558, HG03115, NA20294, NA19355, NA19393, HG03577, HG03172, NA19190, NA19098, HG02769, HG03199, HG03095, HG02621, HG03099, NA18489, HG03452, NA19307, HG02541, HG02595, NA20317, HG03370, NA19131, NA18916, HG02645, HG03578, HG03040, NA19904, HG02111, HG02505, HG03460, HG02703, HG02561, HG02634, NA19235, HG02471, HG02588, HG03352, HG03380, NA19239, HG03267, NA19209, NA19456, NA19025, NA20127, NA18908, HG03114, HG02477, HG03369, NA20318, NA19200, HG02442, HG03120, NA19152, NA18933, HG03547, NA19184, NA19913, NA19455, NA19043, HG03457, HG02144, HG03428, HG01989, HG02307, NA20126, HG03159, HG03123, HG03563, HG03472, HG03085, NA19114, NA19113, HG03571, HG03024, HG02979, NA19257, HG03046, NA19452, HG02585, NA19095, HG02586, HG02896, HG02594, HG01075, NA19436, HG02722, HG03567, HG02813, NA19375, HG02613, HG02455, HG02282, HG02807, HG02557, HG03240, NA19108, HG01915, HG03458, HG02837, HG02611, HG02314, HG03469, NA19310, HG03419, HG03103, HG02771, HG03112, HG03049, NA19713, NA19093, HG03063, HG02462, HG03351, HG03077, HG03538, NA19900, HG03445, HG02851, HG02284, NA18522, HG02808, HG02343, NA19346, HG03166

Known Genes

KRT33A, KRT33B

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3640584

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	135
Observed Complex	0
Frequency	n/a