Variant Details

Variant: esv3638758

Internal ID

7025543

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr16:60047193..60064647	hg38	UCSC Ensembl
Inner	chr16:60047195..60064645	hg38	UCSC Ensembl
Outer	chr16:60047191..60064649	hg38	UCSC Ensembl
	chr16:60081097..60098551	hg19	UCSC Ensembl
Inner	chr16:60081099..60098549	hg19	UCSC Ensembl
Outer	chr16:60081095..60098553	hg19	UCSC Ensembl

Cytoband

16q21

Allele length

Assembly	Allele length
hg38	17455
hg19	17455

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15494801, essv15494731, essv15494773, essv15494785, essv15494788, essv15494755, essv15494764, essv15494790, essv15494789, essv15494792, essv15494753, essv15494783, essv15494735, essv15494728, essv15494786, essv15494797, essv15494759, essv15494754, essv15494746, essv15494739, essv15494742, essv15494771, essv15494740, essv15494795, essv15494744, essv15494775, essv15494756, essv15494737, essv15494794, essv15494750, essv15494769, essv15494760, essv15494757, essv15494765, essv15494732, essv15494779, essv15494766, essv15494730, essv15494752, essv15494787, essv15494781, essv15494800, essv15494778, essv15494780, essv15494738, essv15494729, essv15494767, essv15494749, essv15494796, essv15494798, essv15494799, essv15494751, essv15494743, essv15494791, essv15494774, essv15494762, essv15494776, essv15494741, essv15494768, essv15494734, essv15494736, essv15494793, essv15494784, essv15494758, essv15494747, essv15494777, essv15494761, essv15494802, essv15494745, essv15494772, essv15494782, essv15494733, essv15494748, essv15494763, essv15494770

Samples

HG00442, HG00592, NA19055, HG00608, HG02298, HG02262, HG01326, HG02150, HG03616, HG02382, HG01461, HG00654, HG02356, NA18969, HG02087, HG01997, HG00674, NA18619, HG02301, NA19782, HG02131, NA19720, HG02252, HG02395, HG00743, HG01164, NA18544, HG02265, HG01867, HG01200, HG01247, HG00428, NA19086, HG01864, HG01095, HG01979, HG01941, HG02102, NA19776, NA19064, NA18757, HG01870, HG01286, HG01936, NA19625, NA19003, HG02089, HG01980, HG01357, HG01174, HG01974, HG01933, NA18643, HG01137, NA19783, NA20887, HG04141, HG00513, HG01491, HG01917, HG01804, HG01868, HG02699, NA19716, HG02396, NA19770, HG02186, NA18552, HG01464, HG01082, HG02425, HG01566, HG04153, HG03815, NA18965

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3638758

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	75
Observed Complex	0
Frequency	n/a