A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3638077



Internal ID6678175
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:17381854..17385920hg38UCSC Ensembl
Innerchr16:17381854..17385920hg38UCSC Ensembl
Outerchr16:17381485..17386274hg38UCSC Ensembl
chr16:17475711..17479777hg19UCSC Ensembl
Innerchr16:17475711..17479777hg19UCSC Ensembl
Outerchr16:17475342..17480131hg19UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg384067
hg194067
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv15390821, essv15390876, essv15390800, essv15390830, essv15390809, essv15390765, essv15390760, essv15390869, essv15390844, essv15390788, essv15390753, essv15390813, essv15390750, essv15390762, essv15390834, essv15390797, essv15390820, essv15390825, essv15390808, essv15390744, essv15390773, essv15390770, essv15390769, essv15390738, essv15390756, essv15390853, essv15390817, essv15390793, essv15390829, essv15390783, essv15390880, essv15390741, essv15390751, essv15390864, essv15390872, essv15390822, essv15390828, essv15390879, essv15390818, essv15390865, essv15390805, essv15390866, essv15390871, essv15390836, essv15390758, essv15390833, essv15390768, essv15390772, essv15390859, essv15390796, essv15390874, essv15390831, essv15390875, essv15390824, essv15390807, essv15390867, essv15390846, essv15390790, essv15390841, essv15390745, essv15390870, essv15390848, essv15390827, essv15390816, essv15390747, essv15390743, essv15390878, essv15390837, essv15390742, essv15390804, essv15390787, essv15390852, essv15390799, essv15390757, essv15390826, essv15390801, essv15390835, essv15390798, essv15390740, essv15390855, essv15390881, essv15390777, essv15390748, essv15390882, essv15390815, essv15390784, essv15390761, essv15390752, essv15390850, essv15390842, essv15390776, essv15390860, essv15390792, essv15390779, essv15390755, essv15390838, essv15390810, essv15390802, essv15390819, essv15390785, essv15390782, essv15390839, essv15390811, essv15390794, essv15390746, essv15390795, essv15390832, essv15390861, essv15390806, essv15390759, essv15390775, essv15390851, essv15390780, essv15390845, essv15390789, essv15390774, essv15390739, essv15390862, essv15390823, essv15390863, essv15390791, essv15390857, essv15390786, essv15390749, essv15390766, essv15390781, essv15390771, essv15390764, essv15390814, essv15390858, essv15390856, essv15390877, essv15390873, essv15390767, essv15390847, essv15390778, essv15390849, essv15390854, essv15390868, essv15390812, essv15390803, essv15390843, essv15390763, essv15390840, essv15390754
SamplesHG00403, NA19058, HG02250, HG01965, HG02002, HG01438, HG00671, NA19066, HG02026, NA20274, HG00766, HG02122, HG02029, NA18979, HG01066, HG02277, HG01486, HG02058, HG02050, HG01947, NA18633, HG00663, HG02312, HG02153, HG01070, HG02151, NA19728, NA18995, HG02105, NA18595, HG02383, HG03937, NA18619, HG01843, HG01599, HG02374, HG01840, HG01859, NA18611, NA19651, HG00632, HG02067, NA18617, HG02178, HG01844, HG01198, NA18975, HG03832, HG01967, HG00743, HG00464, HG02402, HG00560, NA18613, HG00629, HG01847, HG01867, HG01841, HG00982, NA19070, NA19056, NA18525, HG01797, HG02025, NA18956, NA18644, HG02397, HG00701, HG02084, HG00436, HG00556, HG02390, HG01845, NA19081, NA19788, NA18534, HG00619, NA19064, NA18537, HG02364, NA20299, HG00844, HG00404, HG00531, HG01197, HG02121, HG02086, HG01130, HG00613, HG00525, HG01842, NA19009, NA18963, NA18536, HG03991, HG00864, NA18570, HG00410, NA18634, HG01107, NA18541, NA19012, NA18978, NA19652, HG02089, NA18535, HG01597, HG01980, HG02088, HG01362, NA18941, HG01874, NA19090, HG01939, HG01977, HG00473, HG02179, HG01951, HG01798, NA18943, NA19085, HG04141, HG00707, HG00614, HG02401, HG02367, NA19779, HG00421, NA18987, HG02113, HG03615, HG01817, NA18552, HG01794, HG01464, NA18989, HG02020, NA18623, HG02351, HG02406, NA19074, HG00437, NA18562, NA18965, NA18620
Known GenesXYLT1
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3638077
Frequency
Sample Size2504
Observed Gain0
Observed Loss145
Observed Complex0
Frequencyn/a


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