Variant Details

Variant: esv3636872

Internal ID

7023666

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr15:72279581..72283242	hg38	UCSC Ensembl
Inner	chr15:72279582..72283242	hg38	UCSC Ensembl
Outer	chr15:72279581..72283243	hg38	UCSC Ensembl
	chr15:72571922..72575583	hg19	UCSC Ensembl
Inner	chr15:72571923..72575583	hg19	UCSC Ensembl
Outer	chr15:72571922..72575584	hg19	UCSC Ensembl

Cytoband

15q23

Allele length

Assembly	Allele length
hg38	3662
hg19	3662

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15289584, essv15289580, essv15289643, essv15289567, essv15289637, essv15289629, essv15289644, essv15289557, essv15289611, essv15289550, essv15289566, essv15289579, essv15289582, essv15289636, essv15289613, essv15289554, essv15289540, essv15289609, essv15289594, essv15289589, essv15289581, essv15289633, essv15289667, essv15289657, essv15289590, essv15289548, essv15289631, essv15289558, essv15289586, essv15289596, essv15289543, essv15289615, essv15289610, essv15289553, essv15289574, essv15289654, essv15289572, essv15289587, essv15289653, essv15289597, essv15289666, essv15289555, essv15289595, essv15289622, essv15289612, essv15289575, essv15289628, essv15289668, essv15289599, essv15289545, essv15289650, essv15289617, essv15289618, essv15289559, essv15289592, essv15289638, essv15289547, essv15289591, essv15289646, essv15289556, essv15289598, essv15289655, essv15289662, essv15289569, essv15289656, essv15289620, essv15289577, essv15289541, essv15289658, essv15289664, essv15289593, essv15289630, essv15289546, essv15289648, essv15289614, essv15289602, essv15289568, essv15289608, essv15289641, essv15289640, essv15289665, essv15289551, essv15289616, essv15289605, essv15289635, essv15289606, essv15289603, essv15289652, essv15289563, essv15289565, essv15289624, essv15289578, essv15289661, essv15289544, essv15289647, essv15289539, essv15289570, essv15289625, essv15289549, essv15289634, essv15289560, essv15289642, essv15289601, essv15289660, essv15289651, essv15289604, essv15289621, essv15289619, essv15289552, essv15289561, essv15289645, essv15289663, essv15289571, essv15289659, essv15289639, essv15289585, essv15289564, essv15289627, essv15289600, essv15289626, essv15289607, essv15289632, essv15289588, essv15289649, essv15289623, essv15289542, essv15289583, essv15289576, essv15289562, essv15289573

Samples

HG02614, HG01985, HG03559, NA19397, HG03378, NA19204, NA18508, HG03163, HG01885, NA19914, HG03175, HG03111, HG03449, HG02891, HG02476, HG03190, NA18878, HG03295, NA20332, NA19377, HG03126, HG03515, HG03297, NA19190, NA19098, NA19920, NA19314, HG03572, NA19201, HG03385, HG03099, NA18489, HG03452, NA19448, HG03091, NA19119, NA19916, HG03370, HG03342, HG02054, NA18498, NA19904, HG02489, HG02505, NA19404, HG03520, HG02703, HG02561, NA19137, NA19238, NA19172, NA19159, NA18864, HG03267, NA19451, HG03270, HG03169, HG02879, HG02819, HG02479, HG02442, HG03120, HG03160, NA19707, HG03088, NA19152, NA19184, HG02449, NA19913, HG02554, HG02450, HG01989, NA20126, HG03159, HG02968, HG02976, HG02429, HG03476, HG02445, NA19042, NA19113, NA18912, NA20282, NA19099, HG03451, HG03391, HG02979, NA19225, HG02332, HG01896, HG02813, NA19401, NA19206, HG02807, NA19390, NA18909, HG03367, HG03117, HG02923, NA20351, NA19835, HG03127, NA19818, NA19143, NA18501, HG03039, HG02971, HG03112, HG01912, NA19472, NA19223, HG03097, HG03066, HG03025, HG02938, HG02053, HG03060, HG03351, NA18873, NA18876, NA19711, HG02051, HG01914, NA18505, NA19129, HG02465, HG03303, NA19429, NA19346, HG03271

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3636872

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	130
Observed Complex	0
Frequency	n/a