Variant Details

Variant: esv3636851

Internal ID

7023645

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr15:71182063..71185594	hg38	UCSC Ensembl
Inner	chr15:71182065..71185593	hg38	UCSC Ensembl
Outer	chr15:71182062..71185596	hg38	UCSC Ensembl
	chr15:71474402..71477933	hg19	UCSC Ensembl
Inner	chr15:71474404..71477932	hg19	UCSC Ensembl
Outer	chr15:71474401..71477935	hg19	UCSC Ensembl

Cytoband

15q23

Allele length

Assembly	Allele length
hg38	3532
hg19	3532

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15285137, essv15285127, essv15285117, essv15285157, essv15285125, essv15285150, essv15285115, essv15285136, essv15285148, essv15285155, essv15285135, essv15285189, essv15285131, essv15285123, essv15285187, essv15285128, essv15285163, essv15285118, essv15285129, essv15285121, essv15285160, essv15285181, essv15285139, essv15285119, essv15285113, essv15285171, essv15285176, essv15285154, essv15285120, essv15285140, essv15285184, essv15285169, essv15285161, essv15285182, essv15285179, essv15285114, essv15285151, essv15285183, essv15285188, essv15285164, essv15285159, essv15285153, essv15285145, essv15285149, essv15285180, essv15285147, essv15285165, essv15285124, essv15285156, essv15285175, essv15285116, essv15285173, essv15285174, essv15285177, essv15285162, essv15285186, essv15285146, essv15285152, essv15285132, essv15285144, essv15285141, essv15285178, essv15285133, essv15285126, essv15285168, essv15285142, essv15285185, essv15285134, essv15285172, essv15285143, essv15285130, essv15285190, essv15285158, essv15285122, essv15285138, essv15285166, essv15285167, essv15285170

Samples

HG03812, HG01412, HG03857, HG01521, HG03228, HG00384, HG00242, HG03821, NA21099, HG00257, HG03941, HG00103, HG02017, HG01486, HG03895, NA20517, NA20507, HG02688, HG00271, NA12812, HG00272, HG00173, HG04144, HG03604, NA12287, NA20513, HG02603, HG00281, HG03595, NA12044, HG03624, HG03995, HG04020, NA20845, HG02780, HG01275, NA21105, HG02737, NA20854, HG03785, HG00183, HG00176, HG03685, NA21119, HG02108, HG04019, NA20126, NA20770, HG03781, NA21116, HG00284, HG01311, NA20867, HG03871, NA20903, NA20856, HG01593, HG00157, HG04159, HG04176, HG00246, HG03774, HG03778, HG02790, NA20804, HG03702, HG01866, NA12763, HG04080, NA20906, HG01577, NA20847, NA21101, HG04161, HG01672, HG03985, HG03931, HG04198

Known Genes

THSD4

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3636851

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	78
Observed Complex	0
Frequency	n/a