Variant Details

Variant: esv3636607

Internal ID

7023401

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr15:57294888..57295691	hg38	UCSC Ensembl
Inner	chr15:57294897..57295682	hg38	UCSC Ensembl
Outer	chr15:57294879..57295700	hg38	UCSC Ensembl
	chr15:57587086..57587889	hg19	UCSC Ensembl
Inner	chr15:57587095..57587880	hg19	UCSC Ensembl
Outer	chr15:57587077..57587898	hg19	UCSC Ensembl

Cytoband

15q21.3

Allele length

Assembly	Allele length
hg38	804
hg19	804

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15259259, essv15259159, essv15259262, essv15259322, essv15259183, essv15259154, essv15259175, essv15259295, essv15259180, essv15259337, essv15259221, essv15259336, essv15259288, essv15259328, essv15259314, essv15259280, essv15259293, essv15259214, essv15259310, essv15259169, essv15259157, essv15259258, essv15259282, essv15259241, essv15259272, essv15259334, essv15259335, essv15259166, essv15259205, essv15259178, essv15259171, essv15259305, essv15259179, essv15259209, essv15259299, essv15259294, essv15259273, essv15259247, essv15259150, essv15259264, essv15259216, essv15259176, essv15259177, essv15259219, essv15259284, essv15259162, essv15259202, essv15259307, essv15259277, essv15259223, essv15259283, essv15259275, essv15259148, essv15259317, essv15259218, essv15259245, essv15259212, essv15259211, essv15259268, essv15259185, essv15259270, essv15259189, essv15259327, essv15259190, essv15259267, essv15259186, essv15259261, essv15259225, essv15259313, essv15259289, essv15259207, essv15259308, essv15259201, essv15259312, essv15259198, essv15259222, essv15259286, essv15259287, essv15259193, essv15259274, essv15259213, essv15259342, essv15259194, essv15259330, essv15259304, essv15259302, essv15259319, essv15259250, essv15259239, essv15259208, essv15259164, essv15259226, essv15259256, essv15259260, essv15259203, essv15259173, essv15259341, essv15259165, essv15259290, essv15259271, essv15259332, essv15259204, essv15259220, essv15259153, essv15259318, essv15259315, essv15259324, essv15259333, essv15259151, essv15259311, essv15259237, essv15259338, essv15259196, essv15259228, essv15259243, essv15259240, essv15259229, essv15259188, essv15259163, essv15259184, essv15259257, essv15259236, essv15259191, essv15259156, essv15259234, essv15259298, essv15259200, essv15259217, essv15259265, essv15259252, essv15259249, essv15259323, essv15259297, essv15259199, essv15259331, essv15259320, essv15259279, essv15259266, essv15259210, essv15259278, essv15259168, essv15259325, essv15259339, essv15259230, essv15259238, essv15259182, essv15259152, essv15259233, essv15259170, essv15259246, essv15259242, essv15259316, essv15259309, essv15259300, essv15259285, essv15259224, essv15259326, essv15259251, essv15259254, essv15259292, essv15259248, essv15259255, essv15259227, essv15259340, essv15259167, essv15259276, essv15259181, essv15259306, essv15259149, essv15259155, essv15259174, essv15259215, essv15259296, essv15259232, essv15259269, essv15259291, essv15259253, essv15259197, essv15259160, essv15259263, essv15259303, essv15259172, essv15259231, essv15259161, essv15259158, essv15259301, essv15259329, essv15259235, essv15259195, essv15259192, essv15259187, essv15259244, essv15259206, essv15259321, essv15259281

Samples

HG04212, HG01441, HG01173, HG02272, HG01303, HG02002, NA19664, HG00242, HG01052, NA12414, HG04229, HG04060, HG02648, HG02262, HG02035, NA11931, HG02150, NA19734, HG02275, HG01970, HG00244, HG02691, HG01456, NA19684, HG01947, NA19669, HG01051, HG01924, HG00337, HG01571, HG01250, NA19746, HG01341, HG01366, HG01953, HG04022, NA19764, NA19728, HG02105, HG01064, HG01997, NA21130, HG02146, HG02266, HG01945, HG01492, HG02301, HG02299, HG00346, HG01063, HG00355, NA21108, HG00369, HG01365, HG01668, HG01393, HG01242, HG00158, HG03830, HG02278, HG00139, HG00277, HG01069, NA19720, NA19651, HG02252, HG01080, HG01067, HG00148, HG01519, HG01170, HG01813, HG01495, HG00262, NA19917, NA19719, HG00232, HG01308, HG01405, HG01176, HG01892, HG01440, HG01950, NA19722, HG01259, NA20889, NA20845, HG02138, HG02104, HG01844, HG02260, HG01967, HG01550, HG01256, HG01942, HG01136, NA20904, HG02265, NA19670, HG02697, NA21119, HG01864, HG01162, HG02253, HG01938, NA19717, HG01979, NA19663, NA19788, HG01941, HG01345, HG02102, HG01149, NA19654, HG01615, HG01392, HG01073, HG01161, HG01512, HG01414, NA20299, NA19774, HG03802, HG02008, HG01241, NA19750, HG01182, HG02259, HG00321, NA19740, HG01497, HG00276, HG02286, NA18531, HG01572, HG00240, NA20542, HG01625, HG01107, HG01992, HG01363, NA19729, HG04227, HG03809, HG01954, HG01980, NA19749, NA19747, NA19732, HG00734, HG02304, HG01939, NA07051, HG01977, HG01375, HG00308, HG01951, HG01494, NA19679, HG01974, HG03870, HG01933, HG01260, NA19741, NA20803, NA19783, HG00339, NA21125, HG01395, HG03600, HG02700, HG01577, HG00371, NA19785, HG01917, NA19779, HG01302, HG00234, NA19726, HG02291, HG01479, HG01251, HG01377, NA20502, HG01920, HG01464, HG03882, NA19758, HG01566, HG01191, NA20908, HG01786, NA21120, HG01926, HG01608

Known Genes

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3636607

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	195
Observed Complex	0
Frequency	n/a