Variant Details

Variant: esv3636558

Internal ID

7023352

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr15:55363348..55364858	hg38	UCSC Ensembl
Inner	chr15:55363348..55364858	hg38	UCSC Ensembl
Outer	chr15:55362930..55365269	hg38	UCSC Ensembl
	chr15:55655546..55657056	hg19	UCSC Ensembl
Inner	chr15:55655546..55657056	hg19	UCSC Ensembl
Outer	chr15:55655128..55657467	hg19	UCSC Ensembl

Cytoband

15q21.3

Allele length

Assembly	Allele length
hg38	1511
hg19	1511

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv15255886, essv15255922, essv15255939, essv15256090, essv15256052, essv15256005, essv15255916, essv15256121, essv15255818, essv15255962, essv15256132, essv15256046, essv15255839, essv15256135, essv15255812, essv15256073, essv15256062, essv15255891, essv15256147, essv15256095, essv15255883, essv15255934, essv15255807, essv15255953, essv15256105, essv15255890, essv15255965, essv15255855, essv15256139, essv15256089, essv15256008, essv15256114, essv15255868, essv15255888, essv15255799, essv15255831, essv15255842, essv15255898, essv15256107, essv15256043, essv15255995, essv15255964, essv15255845, essv15255963, essv15256079, essv15255865, essv15255829, essv15255817, essv15255870, essv15255931, essv15256101, essv15256061, essv15255946, essv15256111, essv15255956, essv15256074, essv15255926, essv15256015, essv15256130, essv15256116, essv15255938, essv15255914, essv15256119, essv15255860, essv15256060, essv15255993, essv15255875, essv15255969, essv15256075, essv15256068, essv15256149, essv15255810, essv15256045, essv15255881, essv15255982, essv15255930, essv15255801, essv15256092, essv15256024, essv15255957, essv15255952, essv15256117, essv15256030, essv15255974, essv15256123, essv15255850, essv15255832, essv15255844, essv15255841, essv15255941, essv15255901, essv15255954, essv15255861, essv15256041, essv15256006, essv15255925, essv15256026, essv15255921, essv15255859, essv15256031, essv15255879, essv15256040, essv15256020, essv15255887, essv15255975, essv15256118, essv15256021, essv15256063, essv15255959, essv15256047, essv15255811, essv15256067, essv15256003, essv15255838, essv15256131, essv15256053, essv15255802, essv15256087, essv15256027, essv15256126, essv15256017, essv15255871, essv15256025, essv15255906, essv15255885, essv15256050, essv15256064, essv15255909, essv15256058, essv15256141, essv15255985, essv15255903, essv15255867, essv15256083, essv15256081, essv15255949, essv15256112, essv15255815, essv15255999, essv15256142, essv15256029, essv15255943, essv15255863, essv15256124, essv15256093, essv15255970, essv15256113, essv15255809, essv15256076, essv15256097, essv15255873, essv15255846, essv15256099, essv15256146, essv15256051, essv15256001, essv15256140, essv15255947, essv15255876, essv15255918, essv15255897, essv15255848, essv15255795, essv15255935, essv15256086, essv15255919, essv15256106, essv15255854, essv15255857, essv15256109, essv15255937, essv15255896, essv15256038, essv15255976, essv15255874, essv15256019, essv15255796, essv15256000, essv15256100, essv15256054, essv15256004, essv15255928, essv15255803, essv15256091, essv15256007, essv15256080, essv15256014, essv15255813, essv15255805, essv15255847, essv15255804, essv15255983, essv15255834, essv15255798, essv15255971, essv15256071, essv15255924, essv15256049, essv15256055, essv15255866, essv15256077, essv15256072, essv15255951, essv15256065, essv15256013, essv15255877, essv15256125, essv15256028, essv15255797, essv15256042, essv15255808, essv15255905, essv15255899, essv15255915, essv15256143, essv15255994, essv15255920, essv15256094, essv15255821, essv15255987, essv15256048, essv15255823, essv15256037, essv15255836, essv15255940, essv15256120, essv15255981, essv15255889, essv15255851, essv15255979, essv15256084, essv15256082, essv15256035, essv15255984, essv15255968, essv15256145, essv15256137, essv15255966, essv15255900, essv15256134, essv15256088, essv15255942, essv15255908, essv15255852, essv15256127, essv15255872, essv15255892, essv15255948, essv15255990, essv15255911, essv15255989, essv15255913, essv15255824, essv15255826, essv15255828, essv15255800, essv15256056, essv15255977, essv15255923, essv15256033, essv15255816, essv15256098, essv15255904, essv15255856, essv15256010, essv15256070, essv15255973, essv15255893, essv15256069, essv15255932, essv15255833, essv15255944, essv15256078, essv15256016, essv15255945, essv15256128, essv15256039, essv15255978, essv15255858, essv15256138, essv15256129, essv15255849, essv15256108, essv15256133, essv15256115, essv15255955, essv15255907, essv15255988, essv15255837, essv15255835, essv15255902, essv15256136, essv15255880, essv15256009, essv15255912, essv15255895, essv15255878, essv15255853, essv15256018, essv15255960, essv15255814, essv15256103, essv15256096, essv15256144, essv15256012, essv15255997, essv15255864, essv15255843, essv15255819, essv15255967, essv15256057, essv15256036, essv15255882, essv15256148, essv15256044, essv15255950, essv15255862, essv15255917, essv15255958, essv15255936, essv15255840, essv15256059, essv15255972, essv15256011, essv15256023, essv15255961, essv15255991, essv15255806, essv15255822, essv15255825, essv15256122, essv15256110, essv15255998, essv15256034, essv15255986, essv15255929, essv15255910, essv15255884, essv15256102, essv15255820, essv15255992, essv15255894, essv15255827, essv15256085, essv15256002, essv15256022, essv15255996, essv15255933, essv15255980, essv15256066, essv15255927, essv15255869, essv15255830, essv15256104, essv15256032

Samples

NA18745, NA12383, NA12717, NA20891, HG02385, HG01624, HG01443, NA20508, NA19066, NA12414, NA21099, HG01815, HG00766, NA12843, HG02231, NA18639, HG01802, HG02050, NA20864, NA18959, HG02215, NA18616, NA20771, NA12750, HG00663, NA20814, HG00717, NA19089, HG01506, NA21135, HG04038, HG03016, HG02690, HG03943, HG03754, NA19764, HG03808, HG00674, NA20774, HG01168, HG04206, NA18567, NA20911, HG03913, NA18960, HG02299, NA07347, NA18582, HG01083, HG00355, HG00311, HG03917, NA19079, NA18949, NA20539, HG04183, HG03910, HG00148, NA21109, NA12044, HG01284, NA18966, NA20889, HG01844, HG01058, HG01709, NA20757, NA20755, HG02164, HG02047, HG00349, NA19091, NA19070, HG02070, NA19006, HG02075, NA19403, HG04039, HG01857, NA20810, NA20760, HG00556, NA19081, HG02522, HG01077, NA18534, NA18981, HG01630, NA19064, NA18548, NA18537, HG03829, NA20867, NA20903, NA19084, NA18626, HG01536, HG00404, HG00479, NA11893, HG03802, HG02657, NA20856, HG03643, NA18553, HG03971, HG03969, HG00146, NA18963, HG04159, HG01936, HG03898, NA19625, HG01075, NA19012, HG04200, NA18632, HG03848, HG01878, NA19072, HG03949, HG01685, HG01396, NA20520, HG03702, HG01866, NA20778, HG02179, HG04099, HG01137, NA19083, NA19783, NA18610, HG01342, HG00620, NA20888, NA20897, HG00614, HG00513, HG02095, NA18631, NA21090, HG04014, NA20852, HG02116, NA18636, NA21093, NA18609, HG01631, HG00112, HG01468, NA18983, HG01794, HG01479, HG00274, NA18957, NA11892, HG02020, HG00628, NA18968, NA20827, NA19063, NA19065, NA20754, HG01437, HG00553, HG00581, NA18577, HG03864, HG03812, HG01795, HG03652, NA19794, HG03965, NA11995, HG03731, HG02298, HG01359, HG03237, HG01860, NA20274, NA18561, HG04202, HG03738, HG04211, HG02061, NA20532, HG02360, HG04094, HG01531, NA19057, NA18596, HG01944, NA18606, HG03667, NA20808, HG00150, NA19669, HG00879, NA12400, HG02023, HG04001, HG01809, HG01500, NA19746, NA19076, NA18550, HG00109, HG03796, HG02151, HG01682, HG03757, HG02407, NA18595, HG00689, HG00173, HG02155, NA19723, HG03937, NA20900, HG02687, NA18619, HG00458, HG01599, HG00634, NA18942, HG03905, HG01816, HG04131, NA18964, HG02786, HG03594, HG00590, HG03830, HG03793, HG01134, NA18749, NA12005, HG04214, HG03826, HG02395, HG00683, HG03268, NA18977, HG03788, HG03746, HG03696, HG03624, NA18986, NA12815, NA19002, NA19445, NA18975, HG00178, NA20533, NA18954, HG00419, NA21122, HG01312, NA19007, HG02009, HG02737, HG00188, NA18544, HG03785, NA19657, HG02136, HG04225, HG01871, HG02513, HG01247, HG01104, NA19077, HG03760, NA20809, HG00653, HG00701, NA18991, NA19913, HG03636, NA20895, HG00584, HG04035, HG04019, HG03756, NA20767, NA18976, HG04180, HG02221, HG00708, HG02364, HG01390, NA18566, HG01615, HG03871, HG01619, HG00956, HG03660, HG02494, NA11894, HG02008, NA18946, NA19001, HG01791, HG04189, HG02283, HG00525, NA18536, NA18945, HG01990, NA18978, NA21113, NA18542, HG03866, HG04188, NA18535, NA18961, NA18543, HG00565, HG02696, HG00375, HG03689, HG00278, HG03850, HG01598, HG03488, NA18643, HG04090, NA19085, NA21125, HG04023, HG01606, HG01432, NA18971, NA20868, HG02238, NA19060, HG00421, NA18987, HG03863, HG02396, HG01085, HG00123, HG03615, HG00698, NA18972, NA18984, HG02028, NA19004, HG01863, NA18549, HG03686, HG01695, NA18562, HG03886

Known Genes

CCPG1, DYX1C1-CCPG1

Method

Sequencing

Analysis

Platform

Multiple platforms

Comments

Reference

1000_Genomes_Consortium_Phase_3

Pubmed ID

21293372

Accession Number(s)

esv3636558

Frequency

Sample Size	2504
Observed Gain	0
Observed Loss	355
Observed Complex	0
Frequency	n/a