A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3636557



Internal ID7023351
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:55363174..55366270hg38UCSC Ensembl
Innerchr15:55363174..55366270hg38UCSC Ensembl
Outerchr15:55362674..55366770hg38UCSC Ensembl
chr15:55655372..55658468hg19UCSC Ensembl
Innerchr15:55655372..55658468hg19UCSC Ensembl
Outerchr15:55654872..55658968hg19UCSC Ensembl
Cytoband15q21.3
Allele length
AssemblyAllele length
hg383097
hg193097
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv15255746, essv15255736, essv15255724, essv15255705, essv15255753, essv15255777, essv15255781, essv15255723, essv15255759, essv15255669, essv15255764, essv15255793, essv15255716, essv15255691, essv15255748, essv15255745, essv15255727, essv15255667, essv15255696, essv15255713, essv15255725, essv15255685, essv15255770, essv15255788, essv15255749, essv15255726, essv15255771, essv15255692, essv15255763, essv15255657, essv15255784, essv15255768, essv15255734, essv15255761, essv15255778, essv15255792, essv15255790, essv15255757, essv15255661, essv15255751, essv15255762, essv15255738, essv15255722, essv15255783, essv15255707, essv15255702, essv15255672, essv15255739, essv15255774, essv15255684, essv15255747, essv15255787, essv15255668, essv15255720, essv15255767, essv15255750, essv15255671, essv15255673, essv15255706, essv15255695, essv15255740, essv15255674, essv15255697, essv15255732, essv15255712, essv15255682, essv15255701, essv15255765, essv15255752, essv15255776, essv15255785, essv15255708, essv15255741, essv15255703, essv15255711, essv15255663, essv15255678, essv15255709, essv15255690, essv15255744, essv15255715, essv15255758, essv15255728, essv15255730, essv15255769, essv15255737, essv15255683, essv15255699, essv15255780, essv15255779, essv15255731, essv15255689, essv15255666, essv15255680, essv15255675, essv15255755, essv15255687, essv15255786, essv15255742, essv15255789, essv15255700, essv15255686, essv15255679, essv15255660, essv15255718, essv15255698, essv15255710, essv15255717, essv15255733, essv15255677, essv15255719, essv15255662, essv15255729, essv15255694, essv15255665, essv15255721, essv15255766, essv15255688, essv15255681, essv15255754, essv15255670, essv15255704, essv15255693, essv15255775, essv15255794, essv15255735, essv15255772, essv15255756, essv15255743, essv15255664, essv15255791, essv15255760, essv15255658, essv15255676, essv15255714, essv15255659, essv15255782, essv15255773
SamplesNA18745, HG03812, HG03652, HG03965, HG01624, HG03237, HG01860, NA20274, HG01815, HG00766, HG04202, HG03738, HG02061, HG01802, NA19057, HG02050, HG01944, NA18959, NA18606, NA19669, HG00879, HG02023, HG01809, HG00717, NA19089, NA19076, NA21135, NA18550, HG02151, HG01682, HG02690, HG02407, NA18595, HG03808, HG00689, HG00674, HG04206, NA18567, HG02687, NA20911, NA18619, HG00458, HG03913, HG01599, NA18960, NA18942, HG01816, NA18582, NA18964, HG03917, NA19079, NA18949, HG03594, HG00590, NA18749, HG04183, HG00683, NA21109, NA18977, NA12815, NA20889, HG01058, HG01709, NA19445, HG00178, NA18954, HG00419, HG02164, NA18544, HG02136, NA19091, NA19070, NA19006, HG02513, HG01247, HG01857, HG01104, NA19077, HG00701, HG00584, NA19081, HG04019, HG02522, NA18976, HG02221, NA19064, NA18537, NA18566, NA20867, HG01619, NA20903, NA19084, HG00956, HG00479, NA19001, HG02283, HG03971, NA18945, NA21113, NA18542, HG03866, HG04188, NA18543, NA19072, HG03949, HG03689, HG01396, HG01866, HG04099, NA18643, HG01137, NA19083, HG04090, NA19085, NA18610, HG00620, NA20888, NA20897, HG00614, HG01432, NA20868, HG02238, HG00421, HG02396, HG02116, NA21093, NA18609, HG03615, HG00274, NA18957, HG02028, HG01863, NA18968, NA19065, NA18549, HG03686, NA18562, NA18577
Known GenesCCPG1, DYX1C1-CCPG1
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3636557
Frequency
Sample Size2504
Observed Gain0
Observed Loss138
Observed Complex0
Frequencyn/a


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