A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3636424



Internal ID6676531
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:49252669..49255670hg38UCSC Ensembl
Innerchr15:49252669..49255670hg38UCSC Ensembl
Outerchr15:49252240..49256030hg38UCSC Ensembl
chr15:49544866..49547867hg19UCSC Ensembl
Innerchr15:49544866..49547867hg19UCSC Ensembl
Outerchr15:49544437..49548227hg19UCSC Ensembl
Cytoband15q21.2
Allele length
AssemblyAllele length
hg383002
hg193002
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv15245044, essv15244757, essv15245017, essv15244815, essv15245094, essv15245007, essv15244889, essv15244788, essv15245027, essv15244790, essv15244972, essv15244840, essv15245186, essv15245123, essv15244908, essv15244715, essv15245098, essv15244896, essv15244879, essv15244955, essv15245241, essv15245198, essv15244850, essv15245076, essv15245199, essv15245148, essv15244994, essv15244813, essv15245121, essv15245015, essv15244756, essv15244791, essv15244952, essv15245041, essv15245215, essv15244981, essv15244996, essv15245192, essv15244976, essv15244822, essv15244783, essv15244819, essv15244836, essv15244760, essv15245269, essv15244870, essv15245159, essv15245009, essv15245263, essv15245183, essv15245086, essv15244992, essv15245249, essv15245261, essv15245232, essv15244887, essv15245270, essv15245145, essv15245128, essv15244851, essv15245201, essv15245031, essv15244911, essv15244973, essv15245103, essv15244767, essv15244721, essv15245268, essv15244968, essv15245089, essv15245097, essv15245114, essv15245078, essv15245255, essv15245081, essv15245250, essv15244923, essv15244864, essv15245160, essv15244882, essv15244725, essv15245238, essv15244702, essv15244895, essv15244771, essv15244711, essv15245195, essv15245051, essv15244940, essv15245110, essv15244837, essv15244834, essv15245020, essv15244884, essv15245239, essv15245046, essv15245251, essv15244846, essv15245072, essv15245134, essv15245191, essv15244890, essv15244845, essv15244777, essv15245196, essv15245157, essv15245240, essv15244764, essv15244745, essv15244856, essv15245099, essv15245264, essv15244977, essv15244886, essv15245126, essv15245217, essv15244910, essv15244839, essv15244728, essv15245100, essv15245197, essv15244873, essv15245185, essv15244828, essv15245188, essv15245113, essv15244843, essv15244716, essv15245055, essv15244938, essv15245227, essv15245120, essv15245180, essv15244765, essv15244823, essv15244768, essv15245136, essv15244722, essv15244724, essv15244926, essv15245102, essv15244916, essv15244708, essv15244922, essv15244984, essv15244945, essv15244924, essv15244957, essv15245174, essv15244907, essv15245065, essv15244966, essv15245181, essv15244959, essv15244763, essv15244944, essv15245161, essv15244902, essv15244869, essv15244997, essv15244995, essv15244929, essv15245156, essv15245143, essv15245151, essv15244951, essv15244909, essv15244852, essv15244774, essv15245037, essv15244927, essv15245252, essv15244855, essv15245106, essv15244827, essv15245223, essv15245112, essv15245108, essv15245179, essv15244932, essv15245144, essv15244718, essv15245117, essv15244915, essv15244872, essv15244753, essv15245169, essv15245062, essv15244875, essv15245091, essv15244900, essv15244949, essv15244748, essv15245258, essv15244930, essv15245235, essv15245074, essv15244801, essv15244920, essv15244943, essv15245008, essv15244735, essv15244793, essv15244871, essv15245175, essv15244993, essv15244792, essv15244975, essv15244847, essv15245129, essv15245061, essv15245047, essv15245039, essv15244737, essv15245242, essv15245247, essv15244762, essv15244814, essv15245135, essv15245229, essv15244727, essv15245014, essv15245122, essv15245011, essv15245234, essv15245048, essv15245101, essv15244891, essv15244829, essv15245168, essv15245133, essv15245149, essv15244988, essv15245116, essv15245125, essv15244983, essv15245222, essv15245276, essv15244773, essv15244824, essv15245207, essv15245012, essv15244867, essv15245154, essv15244818, essv15245038, essv15244931, essv15244982, essv15244919, essv15245206, essv15244703, essv15245166, essv15244758, essv15245211, essv15244868, essv15244841, essv15245105, essv15244865, essv15244933, essv15244953, essv15244989, essv15244899, essv15244785, essv15244730, essv15245052, essv15245158, essv15244954, essv15245087, essv15244862, essv15245005, essv15244876, essv15244714, essv15245178, essv15244998, essv15245107, essv15245245, essv15245013, essv15244787, essv15244928, essv15244857, essv15244746, essv15244786, essv15245127, essv15245214, essv15244987, essv15245095, essv15245231, essv15245173, essv15244713, essv15245248, essv15245153, essv15245049, essv15245155, essv15244720, essv15244859, essv15245040, essv15245073, essv15245205, essv15245018, essv15244974, essv15245171, essv15245266, essv15245002, essv15244806, essv15245216, essv15244893, essv15245177, essv15245054, essv15244741, essv15245059, essv15244811, essv15244739, essv15245190, essv15244942, essv15244964, essv15244906, essv15244719, essv15244950, essv15244921, essv15244766, essv15245053, essv15244991, essv15245042, essv15244849, essv15245032, essv15244848, essv15245069, essv15244726, essv15245119, essv15244750, essv15244729, essv15245137, essv15245056, essv15244990, essv15244736, essv15244769, essv15245267, essv15244776, essv15245024, essv15244799, essv15244754, essv15244802, essv15244752, essv15244967, essv15244706, essv15245221, essv15245243, essv15245006, essv15245164, essv15244723, essv15244833, essv15245077, essv15244817, essv15244971, essv15244709, essv15244935, essv15244854, essv15245109, essv15245224, essv15245080, essv15244742, essv15245273, essv15244901, essv15244770, essv15245246, essv15245067, essv15244853, essv15245083, essv15244779, essv15245194, essv15244892, essv15245253, essv15244860, essv15245184, essv15244999, essv15244712, essv15245130, essv15244897, essv15245058, essv15244812, essv15245068, essv15245096, essv15244986, essv15244778, essv15245189, essv15245257, essv15244937, essv15244939, essv15244861, essv15244821, essv15245162, essv15245001, essv15244917, essv15244888, essv15245260, essv15244816, essv15245139, essv15245003, essv15245172, essv15244795, essv15244782, essv15245111, essv15244826, essv15245079, essv15244913, essv15245092, essv15244948, essv15244947, essv15244830, essv15244825, essv15244717, essv15245004, essv15244772, essv15245057, essv15244903, essv15244941, essv15244885, essv15244962, essv15245212, essv15245163, essv15245140, essv15244738, essv15245226, essv15245254, essv15245071, essv15245203, essv15245000, essv15244798, essv15244958, essv15244710, essv15245262, essv15245272, essv15245225, essv15245022, essv15245204, essv15244863, essv15245256, essv15244956, essv15244880, essv15245147, essv15244789, essv15244878, essv15244858, essv15245019, essv15245170, essv15245236, essv15244883, essv15245244, essv15245082, essv15244809, essv15245274, essv15245146, essv15244704, essv15245220, essv15244780, essv15245036, essv15244804, essv15245021, essv15244963, essv15245023, essv15244808, essv15245063, essv15245085, essv15245213, essv15244761, essv15244842, essv15244978, essv15244807, essv15244866, essv15244936, essv15245233, essv15245230, essv15245165, essv15245210, essv15244881, essv15244775, essv15245010, essv15244894, essv15244749, essv15244705, essv15244844, essv15244985, essv15245035, essv15244797, essv15244734, essv15245193, essv15244820, essv15245050, essv15244898, essv15244743, essv15245090, essv15244810, essv15244781, essv15245118, essv15245030, essv15245088, essv15244965, essv15244794, essv15245138, essv15244905, essv15245218, essv15245141, essv15245271, essv15245167, essv15244747, essv15245228, essv15244784, essv15244980, essv15245200, essv15245142, essv15245029, essv15245025, essv15244877, essv15245152, essv15245043, essv15244970, essv15245275, essv15245045, essv15244835, essv15244751, essv15244969, essv15244918, essv15244838, essv15244934, essv15245208, essv15244759, essv15244979, essv15245132, essv15245033, essv15245176, essv15244740, essv15244914, essv15245124, essv15245066, essv15245187, essv15245084, essv15245070, essv15245219, essv15245150, essv15244912, essv15245026, essv15244803, essv15244707, essv15245115, essv15244755, essv15244946, essv15244832, essv15244733, essv15244904, essv15244744, essv15245131, essv15245209, essv15245064, essv15245259, essv15244925, essv15244805, essv15245075, essv15245016, essv15245104, essv15245034, essv15244731, essv15245182, essv15244961, essv15244874, essv15245237, essv15245265, essv15244800, essv15244960, essv15244831, essv15245060, essv15244732, essv15245202, essv15245028, essv15244796, essv15245093
SamplesNA19028, HG01402, HG01918, HG01965, HG00608, HG03228, NA19664, HG04060, NA21099, HG03175, NA19378, HG01602, NA21100, NA12843, HG03717, HG02231, HG04076, NA12751, HG02600, HG02215, HG03193, NA20863, NA21128, HG01704, NA12750, HG00337, HG01325, HG00356, NA19379, HG03770, NA19315, HG02690, NA20589, HG01177, HG01676, HG01167, NA21130, HG01766, NA20756, NA20911, HG00129, NA18916, NA07048, HG03874, HG03663, NA11918, NA20291, HG02562, HG00281, HG00130, NA20759, NA19720, HG00335, NA20812, NA18868, HG01284, NA19036, NA21129, NA19239, NA19025, HG01967, NA20755, HG01565, NA20800, HG00266, HG03907, HG04039, NA20521, HG01095, HG02449, NA20760, NA19663, HG02731, HG03775, NA12718, NA20832, HG03781, NA12234, NA20876, HG01047, HG03829, NA20903, NA20901, NA21086, HG00331, NA21112, NA11840, HG01613, HG02724, HG02256, NA19682, HG00099, HG02635, HG01988, HG01625, HG03694, HG04200, HG03934, HG03743, NA20851, HG00382, HG03598, NA19440, HG00336, NA19256, NA21144, HG03875, HG03708, NA20870, HG03117, HG01874, NA20520, HG01174, HG03869, HG01342, NA12347, HG03729, HG01785, NA20897, HG02700, HG01765, HG01577, HG03849, HG04098, HG01269, HG00112, HG02291, NA20826, HG02348, HG01914, NA20503, HG02947, HG01756, HG03815, HG01509, HG01618, NA11832, NA20772, HG03989, HG00096, NA20874, HG01060, HG00114, HG00235, NA19648, HG00121, NA20853, HG03652, NA19794, NA11995, HG03821, NA20899, HG04194, NA19704, NA19734, NA20813, HG04094, NA19819, NA12004, NA12058, HG04164, NA20808, NA20346, HG00341, HG00150, NA19669, HG02734, NA12400, HG04001, HG01924, HG00251, HG03640, NA20861, HG03757, HG02541, HG00173, HG04144, HG01459, NA20769, NA19197, HG02655, NA12287, HG04131, NA20513, HG01110, NA20541, HG00277, HG02493, NA19651, HG00120, HG03986, HG00106, HG00236, NA20896, HG01757, NA20340, HG01767, HG03624, NA12889, HG02420, NA19159, HG00182, NA19026, NA19725, NA19189, NA18520, HG03055, NA20587, NA18908, HG02882, HG01605, HG03884, HG01603, HG03709, HG01784, HG01136, HG00188, HG03780, HG03120, NA18613, NA19657, HG02136, HG01790, HG01344, HG02450, HG04035, NA21118, NA21098, HG02497, HG02976, HG02789, HG01777, HG01392, HG01161, HG01414, NA19655, HG00373, NA20859, HG03202, HG01504, HG03625, HG02283, NA20282, HG01705, HG03391, HG01708, NA20828, HG00141, HG02282, NA20801, HG00119, NA12775, HG00375, NA07051, HG01623, NA20504, NA19310, HG00256, HG03557, HG04003, HG03681, NA20887, NA21125, NA20868, HG03646, NA20582, HG00329, NA19713, HG00174, NA19726, HG01617, HG01377, NA07056, NA19146, HG01097, HG01583, HG01976, NA20511, NA19701, HG02658, NA12717, HG01412, NA19703, HG03378, HG02481, HG00102, NA12273, NA20514, NA20878, HG00457, NA20802, NA20294, HG03229, NA20332, HG01051, HG00261, HG00097, NA20771, NA12399, HG00641, HG00272, HG01702, HG02952, HG04042, HG00238, HG03604, HG02301, NA07347, NA21108, HG02733, HG00334, HG03619, HG02252, HG00325, NA19372, NA12044, NA11994, HG03888, HG03691, NA19722, NA20889, HG00118, HG02427, HG01198, HG02260, HG01048, HG01133, HG01626, HG00365, NA20753, HG01256, HG00743, HG00349, HG00154, HG00380, HG00282, HG03714, HG01670, HG00332, HG01669, NA21119, HG01789, HG04195, HG00368, HG00132, NA20314, HG02775, NA20862, HG01142, HG00275, HG01345, HG01077, HG01675, HG00551, HG00239, HG04235, HG03967, NA20525, NA11919, HG00250, NA21124, HG01536, NA20581, HG03713, HG02787, HG02657, HG03631, HG02309, HG03643, HG03953, HG03969, NA19761, HG03914, HG03672, NA12144, HG01680, HG00240, NA12546, HG01075, NA19017, HG02660, NA19375, HG04227, NA19149, HG02010, NA19747, HG01678, HG00353, HG02220, NA20815, HG01551, HG01272, HG01939, HG01396, NA20527, HG00237, NA20902, HG04099, HG01137, HG00339, HG01086, NA18501, HG02694, HG02095, HG04140, HG03642, HG00259, NA20847, NA20849, NA21102, HG02235, NA19093, NA21093, HG00310, HG00280, NA20758, HG03925, HG03872, HG01468, NA19900, HG02774, NA20502, HG01431, NA19430, HG01125, HG00171, HG04153, NA20754, HG00553, HG00255, HG01516, HG03366, NA11830, HG03857, HG02652, HG01521, HG01356, NA20877, HG03548, HG00361, HG03237, HG02318, NA21092, HG03607, HG01970, HG02891, HG03130, HG01531, NA19393, HG00364, HG01971, HG03667, HG00179, HG00177, HG01632, HG02023, HG01694, HG00327, NA19374, NA19792, HG04100, HG03705, NA20850, HG03490, HG02485, HG01488, NA20586, NA19198, HG03370, HG00346, NA12283, NA21103, NA19782, HG02786, NA19404, HG03826, HG03897, HG01398, HG00379, NA20819, HG01628, HG03788, NA19317, HG01405, NA21107, NA20869, HG00309, HG02502, NA19456, NA19445, NA21114, HG00739, HG00264, HG01312, HG03862, HG00260, NA11831, HG00313, HG00133, HG02737, HG01183, HG00290, NA20854, HG03785, HG02233, HG01247, NA12003, NA18516, NA20506, HG01119, NA19658, HG02470, HG02221, NA21116, HG01092, HG03311, HG00273, NA21141, NA20538, HG02649, HG02884, HG03974, HG00117, NA12827, HG03745, HG02292, HG00276, HG01286, NA19095, NA20534, HG01530, NA19035, HG02455, NA21113, NA20522, NA19206, HG03833, NA18909, HG03240, HG01190, HG00285, NA19321, HG02682, NA19435, NA19037, HG02651, NA12046, HG00308, HG03488, HG01494, HG02685, NA06986, NA21088, HG02230, HG03863, HG02654, HG01055, HG00123, HG01089, HG03684, HG00186, HG00131, HG03894, NA20528, HG01251, HG01775, NA19758, NA20763, HG02284, HG01672, NA18522, NA21104, HG00554, HG01695, NA12776
Known GenesGALK2
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3636424
Frequency
Sample Size2504
Observed Gain0
Observed Loss575
Observed Complex0
Frequencyn/a


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