A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3635918



Internal ID7022715
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:25087750..25088893hg38UCSC Ensembl
Innerchr15:25087750..25088893hg38UCSC Ensembl
Outerchr15:25087357..25089339hg38UCSC Ensembl
chr15:25332897..25334040hg19UCSC Ensembl
Innerchr15:25332897..25334040hg19UCSC Ensembl
Outerchr15:25332504..25334486hg19UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg381144
hg191144
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv15186890, essv15186924, essv15186949, essv15186947, essv15186806, essv15186925, essv15186946, essv15186931, essv15186813, essv15186891, essv15186868, essv15186883, essv15186896, essv15186871, essv15186849, essv15186915, essv15186935, essv15186800, essv15186846, essv15186853, essv15186795, essv15186882, essv15186876, essv15186895, essv15186867, essv15186847, essv15186810, essv15186859, essv15186841, essv15186848, essv15186812, essv15186926, essv15186881, essv15186888, essv15186877, essv15186941, essv15186886, essv15186814, essv15186826, essv15186921, essv15186786, essv15186784, essv15186830, essv15186954, essv15186829, essv15186945, essv15186834, essv15186872, essv15186837, essv15186833, essv15186912, essv15186845, essv15186854, essv15186934, essv15186865, essv15186907, essv15186904, essv15186900, essv15186860, essv15186808, essv15186869, essv15186920, essv15186937, essv15186815, essv15186851, essv15186838, essv15186823, essv15186857, essv15186923, essv15186790, essv15186940, essv15186903, essv15186793, essv15186927, essv15186825, essv15186803, essv15186909, essv15186866, essv15186807, essv15186824, essv15186880, essv15186861, essv15186901, essv15186870, essv15186796, essv15186799, essv15186889, essv15186858, essv15186831, essv15186811, essv15186804, essv15186789, essv15186919, essv15186842, essv15186819, essv15186908, essv15186898, essv15186836, essv15186956, essv15186958, essv15186939, essv15186818, essv15186827, essv15186928, essv15186929, essv15186957, essv15186955, essv15186805, essv15186902, essv15186897, essv15186893, essv15186885, essv15186835, essv15186821, essv15186787, essv15186817, essv15186785, essv15186832, essv15186843, essv15186802, essv15186788, essv15186914, essv15186911, essv15186959, essv15186856, essv15186894, essv15186874, essv15186950, essv15186892, essv15186875, essv15186952, essv15186948, essv15186906, essv15186884, essv15186840, essv15186944, essv15186791, essv15186879, essv15186930, essv15186916, essv15186887, essv15186855, essv15186942, essv15186828, essv15186864, essv15186809, essv15186792, essv15186913, essv15186933, essv15186922, essv15186852, essv15186850, essv15186953, essv15186863, essv15186801, essv15186951, essv15186936, essv15186822, essv15186938, essv15186816, essv15186798, essv15186905, essv15186839, essv15186917, essv15186932, essv15186878, essv15186794, essv15186918, essv15186797, essv15186943, essv15186862, essv15186873, essv15186899, essv15186820, essv15186910, essv15186844
SamplesHG00881, HG00536, NA11995, NA19204, NA18592, HG03163, HG01031, HG01052, NA18565, HG02375, HG02026, HG01815, HG02318, NA18979, HG03015, NA18999, HG01806, HG03190, NA12340, NA18530, NA18606, HG00115, NA20507, HG02384, HG01704, NA18633, HG03069, NA18627, HG00622, NA18563, HG00641, HG00272, HG02069, HG01853, NA18595, HG02952, HG00599, HG02383, HG02155, HG03485, HG02756, NA18558, NA18960, HG00610, NA18574, HG02854, HG02374, NA12283, HG01840, HG00451, NA18964, HG00130, NA19923, NA20518, HG00683, HG02067, HG01519, HG00262, HG01072, HG00232, NA11994, NA18617, HG02642, HG00309, HG02502, HG01844, HG01048, HG01058, HG01121, HG02715, HG02164, HG03048, HG00260, NA18645, HG01183, HG00560, NA18747, HG00629, HG00443, HG01841, HG01360, HG00266, NA19082, HG00982, HG01871, HG01670, NA20524, HG02025, HG00360, HG01864, HG00732, HG00653, NA19984, HG01095, HG00657, HG04195, HG03291, NA20810, HG00475, NA20314, HG02731, HG00436, HG01498, NA18579, HG01796, NA18757, NA18566, HG00324, HG03730, HG00844, NA11894, HG01504, NA18912, HG02309, HG02141, HG00117, HG00140, HG01842, NA19257, NA18555, NA18634, NA18593, HG02408, HG02399, NA18541, HG01811, HG00128, HG01812, HG00476, NA19309, HG00336, NA18961, HG01678, NA19072, HG01551, HG01253, HG01958, NA19380, HG00473, HG02179, NA18629, NA20504, NA20797, NA07037, HG00662, HG00339, HG02133, HG01801, HG00107, NA20357, HG02398, HG00421, HG00342, NA20334, HG03279, HG00267, HG02396, NA20510, HG00280, HG00728, HG01479, NA07056, NA19004, HG01863, NA18968, HG01672, HG03118, HG03303, HG02406, HG01805, HG01437, HG00978, HG03166, NA18577, NA18620, NA20511
Known GenesSNORD116-20, SNORD116-21
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3635918
Frequency
Sample Size2504
Observed Gain0
Observed Loss176
Observed Complex0
Frequencyn/a


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