A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3635909



Internal ID7022706
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:24861890..24864325hg38UCSC Ensembl
Innerchr15:24861890..24864325hg38UCSC Ensembl
Outerchr15:24861602..24864594hg38UCSC Ensembl
chr15:25107037..25109472hg19UCSC Ensembl
Innerchr15:25107037..25109472hg19UCSC Ensembl
Outerchr15:25106749..25109741hg19UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg382436
hg192436
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv15185062, essv15185042, essv15185028, essv15184949, essv15185020, essv15185001, essv15184939, essv15185018, essv15185090, essv15185093, essv15185068, essv15184977, essv15185052, essv15185083, essv15185046, essv15185050, essv15184981, essv15184959, essv15185032, essv15185012, essv15185048, essv15184965, essv15184936, essv15184933, essv15185076, essv15184934, essv15185079, essv15185034, essv15185016, essv15184954, essv15185066, essv15185031, essv15184991, essv15185070, essv15185036, essv15185080, essv15184962, essv15185078, essv15184993, essv15185060, essv15184990, essv15184971, essv15184972, essv15184964, essv15185077, essv15185024, essv15184938, essv15185064, essv15184957, essv15185075, essv15185071, essv15185059, essv15184963, essv15185049, essv15184997, essv15184944, essv15185030, essv15185057, essv15184983, essv15185082, essv15185085, essv15185045, essv15185063, essv15185033, essv15185005, essv15184976, essv15185044, essv15184945, essv15185091, essv15185087, essv15185022, essv15185003, essv15184950, essv15185055, essv15185023, essv15185056, essv15184984, essv15185014, essv15185037, essv15185038, essv15184960, essv15185047, essv15184966, essv15185086, essv15185065, essv15184953, essv15185008, essv15184940, essv15185043, essv15184980, essv15185017, essv15184932, essv15184978, essv15184973, essv15184979, essv15184955, essv15184968, essv15184975, essv15184937, essv15185081, essv15185009, essv15184982, essv15184958, essv15184989, essv15184951, essv15185061, essv15184999, essv15185054, essv15184967, essv15185025, essv15184995, essv15184956, essv15185069, essv15185088, essv15184994, essv15184996, essv15185004, essv15185051, essv15184929, essv15185026, essv15184987, essv15185089, essv15185029, essv15185058, essv15185074, essv15185039, essv15185073, essv15185013, essv15185067, essv15185019, essv15185040, essv15185006, essv15185053, essv15184998, essv15184943, essv15185041, essv15184948, essv15184931, essv15184969, essv15184970, essv15184941, essv15185002, essv15184952, essv15184930, essv15184988, essv15185015, essv15185035, essv15184946, essv15184935, essv15185027, essv15184986, essv15185092, essv15184985, essv15185072, essv15184947, essv15184974, essv15185021, essv15184992, essv15185011, essv15185010, essv15185007, essv15185084, essv15185000, essv15184942, essv15184961
SamplesHG03514, HG01986, NA18502, NA20339, HG01303, NA19466, NA18508, HG03163, NA18980, NA20274, NA19378, HG01188, HG02419, HG02836, NA19020, NA18603, HG03558, NA19092, HG02804, HG02476, NA19355, HG00452, HG04164, HG03577, NA18870, HG01051, HG03836, NA18510, HG02769, HG03464, NA19089, NA18940, NA18519, HG03086, NA19201, HG03168, HG03499, HG00689, HG02595, NA19131, NA19197, NA19023, HG01063, HG00355, NA18498, HG01242, HG02981, HG02281, HG03209, HG02143, NA19041, NA20278, HG03556, NA18874, NA18868, NA19917, NA19137, NA19372, HG03195, HG00422, NA19471, NA18986, NA19189, NA19239, NA20342, NA18908, NA18867, NA19451, HG00543, NA19247, NA19210, NA18538, HG03088, HG02025, NA19347, HG03760, NA18933, NA18956, HG02322, NA19982, HG00533, NA20126, HG03159, HG02014, HG02470, HG02976, HG02878, HG03124, HG00708, HG03123, HG03563, NA18879, HG03202, HG02577, HG03078, HG02008, NA18912, HG02979, HG02585, HG02256, NA18523, HG01286, NA19160, NA19625, NA18858, NA18646, NA19436, NA19035, HG03567, NA19308, HG02330, NA18533, NA19390, NA18535, NA19149, NA19147, NA18517, HG02799, HG02501, HG02049, HG02546, HG00565, HG02721, HG01685, NA19037, HG03117, HG00638, NA19331, HG01396, NA19144, HG02314, NA18865, NA19334, HG03433, NA19439, NA18629, NA19310, HG02839, NA18643, HG01108, HG03557, HG00662, HG02133, HG03565, HG03432, NA20348, HG02974, HG03442, HG02401, HG03313, NA18994, HG00186, NA19116, HG03401, HG03162, HG02947, NA19129, NA19004, HG03376, HG03867, HG03198, NA18549, NA19429, NA19214, HG03265
Known GenesSNRPN
MethodSequencing
Analysis
PlatformMultiple platforms
Comments
Reference1000_Genomes_Consortium_Phase_3
Pubmed ID21293372
Accession Number(s)esv3635909
Frequency
Sample Size2504
Observed Gain0
Observed Loss165
Observed Complex0
Frequencyn/a


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